RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 C1orf115Q9H7X2 142 aa23.2■■□□□ 1.3
CIRBP-245ENST00000621399 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
CIRBP-245ENST00000621399 RTFDC1Q9BY42 306 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-245ENST00000621399 XDHP47989 1333 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 C6orf229H3BNL8 230 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 ZNF784Q8NCA9 323 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-245ENST00000621399 KLHDC4Q8TBB5 520 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 PODXL2Q9NZ53 605 aa23.18■■□□□ 1.3
CIRBP-245ENST00000621399 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
CIRBP-245ENST00000621399 RFX5P48382 616 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-245ENST00000621399 MTX1Q13505 466 aa23.17■■□□□ 1.3
CIRBP-245ENST00000621399 TBC1D16Q8TBP0 767 aa23.17■■□□□ 1.3
CIRBP-245ENST00000621399 PUS3Q9BZE2 481 aaKnown RBP23.17■■□□□ 1.3
CIRBP-245ENST00000621399 GGA1Q9UJY5 639 aa23.17■■□□□ 1.3
CIRBP-245ENST00000621399 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
CIRBP-245ENST00000621399 FER1L6Q2WGJ9 1857 aa23.17■■□□□ 1.3
CIRBP-245ENST00000621399 CHRNDQ07001 517 aa23.16■■□□□ 1.3
CIRBP-245ENST00000621399 ZBTB40Q9NUA8 1239 aa23.16■■□□□ 1.3
CIRBP-245ENST00000621399 POLLQ9UGP5 575 aa23.16■■□□□ 1.3
CIRBP-245ENST00000621399 UFL1O94874 794 aa23.15■■□□□ 1.3
CIRBP-245ENST00000621399 ATP2B4P23634 1241 aa23.15■■□□□ 1.3
CIRBP-245ENST00000621399 PTPN12Q05209 780 aaKnown RBP23.15■■□□□ 1.3
CIRBP-245ENST00000621399 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
CIRBP-245ENST00000621399 VPS33BQ9H267 617 aa23.15■■□□□ 1.3
CIRBP-245ENST00000621399 LRRC37AA6NMS7 1700 aa23.15■■□□□ 1.3
CIRBP-245ENST00000621399 PPIP5K2O43314 1243 aa23.14■■□□□ 1.29
CIRBP-245ENST00000621399 ATP8B2P98198 1209 aa23.14■■□□□ 1.29
CIRBP-245ENST00000621399 AOC3Q16853 763 aa23.14■■□□□ 1.29
CIRBP-245ENST00000621399 WASHC4Q2M389 1173 aa23.14■■□□□ 1.29
CIRBP-245ENST00000621399 HELBQ8NG08 1087 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-245ENST00000621399 EYA3Q99504 573 aa23.14■■□□□ 1.29
CIRBP-245ENST00000621399 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
CIRBP-245ENST00000621399 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
CIRBP-245ENST00000621399 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
CIRBP-245ENST00000621399 LEMD3Q9Y2U8 911 aa23.13■■□□□ 1.29
CIRBP-245ENST00000621399 RIPOR2Q9Y4F9 1068 aa23.13■■□□□ 1.29
CIRBP-245ENST00000621399 MROH5Q6ZUA9 1318 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 EYA2O00167 538 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 RIMBP2O15034 1052 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 TAF5LO75529 589 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 KCNJ4P48050 445 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 GPR101Q96P66 508 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-245ENST00000621399 ZC3H12CQ9C0D7 883 aaKnown RBP23.12■■□□□ 1.29
CIRBP-245ENST00000621399 SIL1Q9H173 461 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 COPRSQ9NQ92 184 aa23.12■■□□□ 1.29
CIRBP-245ENST00000621399 PA2G4Q9UQ80 394 aaKnown RBP23.12■■□□□ 1.29
CIRBP-245ENST00000621399 METTL24Q5JXM2 366 aa23.11■■□□□ 1.29
CIRBP-245ENST00000621399 CEP85Q6P2H3 762 aa23.11■■□□□ 1.29
CIRBP-245ENST00000621399 ZNF804BA4D1E1 1349 aa23.1■■□□□ 1.29
CIRBP-245ENST00000621399 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
CIRBP-245ENST00000621399 SPEF2Q9C093 1822 aa23.1■■□□□ 1.29
CIRBP-245ENST00000621399 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-245ENST00000621399 CRBNQ96SW2 442 aa23.1■■□□□ 1.29
CIRBP-245ENST00000621399 FBXO3Q9UK99 471 aa23.1■■□□□ 1.29
CIRBP-245ENST00000621399 CIAO1O76071 339 aa23.09■■□□□ 1.29
CIRBP-245ENST00000621399 POLA2Q14181 598 aa23.09■■□□□ 1.29
CIRBP-245ENST00000621399 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
CIRBP-245ENST00000621399 SSH3Q8TE77 659 aa23.09■■□□□ 1.29
CIRBP-245ENST00000621399 CHD4Q14839 1912 aa23.09■■□□□ 1.29
CIRBP-245ENST00000621399 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.29
CIRBP-245ENST00000621399 ATG9AQ7Z3C6 839 aa23.08■■□□□ 1.29
CIRBP-245ENST00000621399 RPAP2Q8IXW5 612 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-245ENST00000621399 SBF1O95248 1867 aa23.08■■□□□ 1.29
CIRBP-245ENST00000621399 G3V3G9 751 aa23.07■■□□□ 1.28
CIRBP-245ENST00000621399 SNAP23O00161 211 aa23.07■■□□□ 1.28
CIRBP-245ENST00000621399 IL15P40933 162 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-245ENST00000621399 DCAF8Q5TAQ9 597 aa23.07■■□□□ 1.28
CIRBP-245ENST00000621399 LTBP1Q14766 1721 aa23.07■■□□□ 1.28
CIRBP-245ENST00000621399 PDE8BO95263 885 aa23.06■■□□□ 1.28
CIRBP-245ENST00000621399 DOK7Q18PE1 504 aa23.06■■□□□ 1.28
CIRBP-245ENST00000621399 ZNRF3Q9ULT6 936 aa23.06■■□□□ 1.28
CIRBP-245ENST00000621399 FZD9O00144 591 aa23.05■■□□□ 1.28
CIRBP-245ENST00000621399 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.28
CIRBP-245ENST00000621399 CEP126Q9P2H0 1117 aa23.05■■□□□ 1.28
CIRBP-245ENST00000621399 MED23Q9ULK4 1368 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 SURF6O75683 361 aaKnown RBP23.04■■□□□ 1.28
CIRBP-245ENST00000621399 KLRK1P26718 216 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 EIF6P56537 245 aaKnown RBP23.04■■□□□ 1.28
CIRBP-245ENST00000621399 UBE4AQ14139 1066 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 VGLL2Q8N8G2 317 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 DBNDD1Q9H9R9 158 aa23.04■■□□□ 1.28
CIRBP-245ENST00000621399 COL4A5P29400 1685 aa23.03■■□□□ 1.28
CIRBP-245ENST00000621399 HMMRO75330 724 aa23.03■■□□□ 1.28
CIRBP-245ENST00000621399 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
CIRBP-245ENST00000621399 ECE2O60344 883 aa23.02■■□□□ 1.28
CIRBP-245ENST00000621399 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-245ENST00000621399 PUM3Q15397 648 aaKnown RBP23.02■■□□□ 1.28
CIRBP-245ENST00000621399 SIRT2Q8IXJ6 389 aa23.02■■□□□ 1.28
CIRBP-245ENST00000621399 ZNF526Q8TF50 670 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-245ENST00000621399 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
CIRBP-245ENST00000621399 ZNF541Q9H0D2 1346 aa23.02■■□□□ 1.28
CIRBP-245ENST00000621399 GLTPD2A6NH11 291 aa23.01■■□□□ 1.27
CIRBP-245ENST00000621399 C15orf52Q6ZUT6 534 aaKnown RBP23.01■■□□□ 1.27
CIRBP-245ENST00000621399 TFCP2Q12800 502 aa23■■□□□ 1.27
CIRBP-245ENST00000621399 COA1Q9GZY4 146 aa23■■□□□ 1.27
CIRBP-245ENST00000621399 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms