RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-209ENST00000620502 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
BRCC3-209ENST00000620502 GIGYF1O75420 1035 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-209ENST00000620502 POLD1P28340 1107 aa8.53□□□□□ -1.04
BRCC3-209ENST00000620502 SYT17Q9BSW7 474 aa8.53□□□□□ -1.04
BRCC3-209ENST00000620502 FHDC1Q9C0D6 1143 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-209ENST00000620502 SRP68Q9UHB9 627 aaKnown RBP8.53□□□□□ -1.04
BRCC3-209ENST00000620502 USP42Q9H9J4 1324 aaKnown RBP8.53□□□□□ -1.04
BRCC3-209ENST00000620502 COL15A1P39059 1388 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 SENP3-EIF4A1A0A087X0R7 540 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 ADH1BP00325 375 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-209ENST00000620502 PIP4K2AP48426 406 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-209ENST00000620502 NBPF10Q6P3W6 841 aaKnown RBP8.52□□□□□ -1.05
BRCC3-209ENST00000620502 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 NBPF15Q8N660 670 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 TBC1D2Q9BYX2 928 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 NARFQ9UHQ1 456 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 TSPYL4Q9UJ04 414 aa8.52□□□□□ -1.05
BRCC3-209ENST00000620502 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-209ENST00000620502 MMP10P09238 476 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 TM4SF1P30408 202 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 PPP1R18Q6NYC8 613 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 SPSB2Q99619 263 aa8.51□□□□□ -1.05
BRCC3-209ENST00000620502 LAS1LQ9Y4W2 734 aaKnown RBP8.51□□□□□ -1.05
BRCC3-209ENST00000620502 A0A087WZG4 1122 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 NDUFV2P19404 249 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-209ENST00000620502 KRT24Q2M2I5 525 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 Q3C1V9 767 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 WWC1Q8IX03 1113 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 IFT57Q9NWB7 429 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 PCDHGC3Q9UN70 934 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
BRCC3-209ENST00000620502 SCN7AQ01118 1682 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 GJA5P36382 358 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 GNAI1P63096 354 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 DDR1Q08345 913 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
BRCC3-209ENST00000620502 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
BRCC3-209ENST00000620502 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 CD2APQ9Y5K6 639 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
BRCC3-209ENST00000620502 AFDNP55196 1824 aaKnown RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 POLRMTO00411 1230 aaKnown RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 CAMTA2O94983 1202 aa8.48□□□□□ -1.05
BRCC3-209ENST00000620502 FDX1P10109 184 aa8.48□□□□□ -1.05
BRCC3-209ENST00000620502 CALD1Q05682 793 aaKnown RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 NFIXQ14938 502 aa8.48□□□□□ -1.05
BRCC3-209ENST00000620502 LRP10Q7Z4F1 713 aa8.48□□□□□ -1.05
BRCC3-209ENST00000620502 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 ZNF330Q9Y3S2 320 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-209ENST00000620502 NRXN2Q9P2S2 1712 aa8.48□□□□□ -1.05
BRCC3-209ENST00000620502 S1PR4O95977 384 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 MYL6BP14649 208 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
BRCC3-209ENST00000620502 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 TBC1D9BQ66K14 1250 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 RSBN1LQ6PCB5 846 aaPredicted RBP8.47□□□□□ -1.05
BRCC3-209ENST00000620502 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 SLC6A16Q9GZN6 736 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 IL16Q14005 1332 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
BRCC3-209ENST00000620502 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.05
BRCC3-209ENST00000620502 N4BP2Q86UW6 1770 aaPredicted RBP8.46□□□□□ -1.05
BRCC3-209ENST00000620502 SPTLC1O15269 473 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 HOXB7P09629 217 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 HLFQ16534 295 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 PROSER3Q2NL68 480 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 MSS51Q4VC12 460 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 TTLL7Q6ZT98 887 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 WDR63Q8IWG1 891 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 C8orf58Q8NAV2 365 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 SRCAPQ6ZRS2 3230 aa8.46□□□□□ -1.06
BRCC3-209ENST00000620502 NUP98P52948 1817 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 ELL2O00472 640 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-209ENST00000620502 RGS20O76081 388 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 ANXA1P04083 346 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 SERPINB2P05120 415 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 GGCXP38435 758 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 CLEC4GQ6UXB4 293 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms