RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 BRPF1P55201 1214 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 EHBP1Q8NDI1 1231 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CLIP2Q9UDT6 1046 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 A0A1B0GVL5 298 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CMTR1Q8N1G2 835 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 ZMAT2Q96NC0 199 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 CYP46A1Q9Y6A2 500 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 TNIP1Q15025 636 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CHRM1P11229 460 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 TFCP2Q12800 502 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 RNF168Q8IYW5 571 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 NAP1L3Q99457 506 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 ZPR1O75312 459 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 BICD2Q8TD16 824 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SELENOOQ9BVL4 669 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 TFR2Q9UP52 801 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SYT10Q6XYQ8 523 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 ANAPC4Q9UJX5 808 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 EVC2Q86UK5 1308 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SLC27A2O14975 620 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 URI1O94763 535 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 CCDC175P0C221 793 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 PHLDB2Q86SQ0 1253 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SAAL1Q96ER3 474 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 LUC7L2Q9Y383 392 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 MAP7D1Q3KQU3 841 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CHPF2Q9P2E5 772 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 PPFIA1Q13136 1202 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 IFNKQ9P0W0 207 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 SPA17Q15506 151 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 GBP6Q6ZN66 633 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 MYRIPQ8NFW9 859 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 RNF10Q8N5U6 811 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 IQSEC3Q9UPP2 1182 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 BUB1BO60566 1050 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 AMPD3Q01432 767 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 GOLPH3LQ9H4A5 285 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 FANCLQ9NW38 375 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CPLX1O14810 134 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 NBPF9Q3BBW0 867 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 CYP2E1P05181 493 aaPredicted RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 MAP3K2Q9Y2U5 619 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 KIF4AO95239 1232 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 FSIP1Q8NA03 581 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 LOC102724159A0A0B4J2E5 919 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 ANAPC15P60006 121 aa3.52□□□□□ -1.85
NEB-220ENST00000618972 PWP2Q15269 919 aaKnown RBP3.52□□□□□ -1.85
NEB-220ENST00000618972 VEGFAP15692 232 aaPredicted RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 CUL4AQ13619 759 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 KIAA1524Q8TCG1 905 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 RNASE9P60153 205 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 RXRAP19793 462 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 TTC31Q49AM3 519 aaPredicted RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 CCDC181Q5TID7 509 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 VPS53Q5VIR6 699 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 JADE2Q9NQC1 790 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 IMPACTQ9P2X3 320 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 CTNNA3Q9UI47 895 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 RBM8AQ9Y5S9 174 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 N4BP1O75113 896 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 KRT32Q14532 448 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 MARCH10Q8NA82 808 aaPredicted RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 HOXC8P31273 242 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 KRT85P78386 507 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 FKBP4Q02790 459 aaKnown RBP eCLIP3.51□□□□□ -1.85
NEB-220ENST00000618972 CHADLQ6NUI6 762 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 GBP7Q8N8V2 638 aaPredicted RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 XAGE3Q8WTP9 111 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 ZC3H15Q8WU90 426 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 STX17P56962 302 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 TEFQ10587 303 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 CEP135Q66GS9 1140 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 WASF1Q92558 559 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 ADORA1P30542 326 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 CDC37L1Q7L3B6 337 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 STIM2Q9P246 746 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 UBTFL1P0CB47 393 aaPredicted RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 LTKP29376 864 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 PDE6BP35913 854 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 KIAA0753Q2KHM9 967 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 DZIP1Q86YF9 867 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 RASSF8Q8NHQ8 419 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 MTX1Q13505 466 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 EPB41L2O43491 1005 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 COPS6Q7L5N1 327 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 JAKMIP2Q96AA8 810 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 ADD1P35611 737 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 CTTNBP2NLQ9P2B4 639 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 HDAC9Q9UKV0 1011 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 MGEA5O60502 916 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 USP49Q70CQ1 688 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 NUP133Q8WUM0 1156 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 LRRC27Q9C0I9 530 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 TNMDQ9H2S6 317 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 POTEJP0CG39 1038 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 CAPN2P17655 700 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 SLC8A1P32418 973 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 EIF5P55010 431 aaKnown RBP3.51□□□□□ -1.85
NEB-220ENST00000618972 CPLX4Q7Z7G2 160 aa3.51□□□□□ -1.85
NEB-220ENST00000618972 NLRP5P59047 1200 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms