RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 SPTLC3Q9NUV7 552 aa23.66■■□□□ 1.38
PCSK6-217ENST00000618548 KIAA1328Q86T90 577 aa23.65■■□□□ 1.38
PCSK6-217ENST00000618548 GOLGA1Q92805 767 aa23.65■■□□□ 1.38
PCSK6-217ENST00000618548 RASSF4Q9H2L5 321 aa23.65■■□□□ 1.38
PCSK6-217ENST00000618548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.385e-6■■■■□ 20.8
PCSK6-217ENST00000618548 MTMR7Q9Y216 660 aa23.65■■□□□ 1.38
PCSK6-217ENST00000618548 NDUFB9Q9Y6M9 179 aa23.65■■□□□ 1.38
PCSK6-217ENST00000618548 TDRD7Q8NHU6 1098 aaKnown RBP23.64■■□□□ 1.38
PCSK6-217ENST00000618548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.64■■□□□ 1.385e-6■■■■□ 23.6
PCSK6-217ENST00000618548 CNNM1Q9NRU3 951 aa23.64■■□□□ 1.37
PCSK6-217ENST00000618548 CCDC181Q5TID7 509 aa23.64■■□□□ 1.37
PCSK6-217ENST00000618548 GPATCH11Q8N954 259 aa23.64■■□□□ 1.37
PCSK6-217ENST00000618548 CDC42BPAQ5VT25 1732 aa23.64■■□□□ 1.37
PCSK6-217ENST00000618548 TMEM87AQ8NBN3 555 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 EDC3Q96F86 508 aaKnown RBP23.63■■□□□ 1.37
PCSK6-217ENST00000618548 NUP88Q99567 741 aaPredicted RBP23.63■■□□□ 1.37
PCSK6-217ENST00000618548 PLXNC1O60486 1568 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 NEK11Q8NG66 645 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 CENPHQ9H3R5 247 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 FANCCQ00597 558 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 ARID5BQ14865 1188 aa23.63■■□□□ 1.37
PCSK6-217ENST00000618548 POTEB2H3BUK9 544 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 MRFAP1L1Q96HT8 127 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 GTF2A1P52655 376 aaPredicted RBP23.62■■□□□ 1.37
PCSK6-217ENST00000618548 LINS1Q8NG48 757 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 BICC1Q9H694 974 aaKnown RBP23.62■■□□□ 1.37
PCSK6-217ENST00000618548 RHOXF2BP0C7M4 288 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 IARSP41252 1262 aaKnown RBP23.62■■□□□ 1.37
PCSK6-217ENST00000618548 MAP9Q49MG5 647 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 RHOXF2Q9BQY4 288 aa23.62■■□□□ 1.37
PCSK6-217ENST00000618548 ABCA8O94911 1581 aa23.61■■□□□ 1.37
PCSK6-217ENST00000618548 PPP2R3AQ06190 1150 aa23.61■■□□□ 1.37
PCSK6-217ENST00000618548 TATP17735 454 aaPredicted RBP23.61■■□□□ 1.37
PCSK6-217ENST00000618548 TXLNAP40222 546 aa23.61■■□□□ 1.37
PCSK6-217ENST00000618548 ATP7AQ04656 1500 aa23.61■■□□□ 1.37
PCSK6-217ENST00000618548 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
PCSK6-217ENST00000618548 ALG1Q9BT22 464 aa23.61■■□□□ 1.37
PCSK6-217ENST00000618548 IBSPP21815 317 aaPredicted RBP23.6■■□□□ 1.37
PCSK6-217ENST00000618548 OAS2P29728 719 aaKnown RBP23.6■■□□□ 1.37
PCSK6-217ENST00000618548 USP28Q96RU2 1077 aa23.6■■□□□ 1.37
PCSK6-217ENST00000618548 EDC4Q6P2E9 1401 aaKnown RBP23.6■■□□□ 1.37
PCSK6-217ENST00000618548 USP8P40818 1118 aa23.6■■□□□ 1.37
PCSK6-217ENST00000618548 IMPACTQ9P2X3 320 aa23.6■■□□□ 1.37
PCSK6-217ENST00000618548 IVLP07476 585 aa23.6■■□□□ 1.37
PCSK6-217ENST00000618548 MYL5Q02045 173 aa23.6■■□□□ 1.37
PCSK6-217ENST00000618548 BAG1Q99933 345 aaPredicted RBP23.6■■□□□ 1.37
PCSK6-217ENST00000618548 ZNF710Q8N1W2 664 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 MYOM2P54296 1465 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 A0A0D9SFI3 127 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CCDC175P0C221 793 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CABP4P57796 275 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 AMOTL2Q9Y2J4 779 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 GOLGA8AA7E2F4 631 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 METAP2P50579 478 aaKnown RBP eCLIP23.59■■□□□ 1.37
PCSK6-217ENST00000618548 FBXO38Q6PIJ6 1188 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 C11orf57Q6ZUT1 292 aaPredicted RBP23.59■■□□□ 1.37
PCSK6-217ENST00000618548 DDX41Q9UJV9 622 aaKnown RBP23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CTAGE15A4D2H0 777 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CTAGE8P0CG41 777 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CTR9Q6PD62 1173 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CTAGE6Q86UF2 777 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 CTAGE4Q8IX94 777 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 WASF1Q92558 559 aa23.59■■□□□ 1.37
PCSK6-217ENST00000618548 COPS6Q7L5N1 327 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 KCNF1Q9H3M0 494 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 FLT4P35916 1363 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 SHTN1A0MZ66 631 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 TERF2Q15554 542 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 NCOA7Q8NI08 942 aa23.58■■□□□ 1.37
PCSK6-217ENST00000618548 AK9Q5TCS8 1911 aa23.57■■□□□ 1.36
PCSK6-217ENST00000618548 GTF2E1P29083 439 aaPredicted RBP23.57■■□□□ 1.36
PCSK6-217ENST00000618548 ETF1P62495 437 aaKnown RBP23.57■■□□□ 1.36
PCSK6-217ENST00000618548 AMOTQ4VCS5 1084 aa23.57■■□□□ 1.36
PCSK6-217ENST00000618548 XAGE3Q8WTP9 111 aa23.57■■□□□ 1.36
PCSK6-217ENST00000618548 TDO2P48775 406 aa23.57■■□□□ 1.36
PCSK6-217ENST00000618548 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
PCSK6-217ENST00000618548 DHX37Q8IY37 1157 aaKnown RBP23.57■■□□□ 1.36
PCSK6-217ENST00000618548 AIDAQ96BJ3 306 aa23.57■■□□□ 1.36
PCSK6-217ENST00000618548 ELP1O95163 1332 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 TFCP2Q12800 502 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 ZNF569Q5MCW4 686 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 ATL3Q6DD88 541 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 VPS37DQ86XT2 251 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 IPO4Q8TEX9 1081 aaKnown RBP23.56■■□□□ 1.36
PCSK6-217ENST00000618548 SLC26A6Q9BXS9 759 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 CEP131Q9UPN4 1083 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 ZNF202O95125 648 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 SMC1AQ14683 1233 aaKnown RBP23.56■■□□□ 1.36
PCSK6-217ENST00000618548 HSP90AB3PQ58FF7 597 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 PRDM4Q9UKN5 801 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 N4BP3O15049 544 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 CDR1P51861 262 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 SLC39A6Q13433 755 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 SLC12A7Q9Y666 1083 aa23.56■■□□□ 1.36
PCSK6-217ENST00000618548 IFIT3O14879 490 aaKnown RBP23.55■■□□□ 1.36
PCSK6-217ENST00000618548 PRC1O43663 620 aa23.55■■□□□ 1.36
PCSK6-217ENST00000618548 AFMP43652 599 aa23.55■■□□□ 1.36
PCSK6-217ENST00000618548 STIM1Q13586 685 aa23.55■■□□□ 1.36
PCSK6-217ENST00000618548 SYCP1Q15431 976 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms