RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ADGRL3Q9HAR2 1447 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 C2CD5Q86YS7 1000 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MPHOSPH9Q99550 1183 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 ZFYVE28Q9HCC9 887 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 GTF3C2Q8WUA4 911 aaPredicted RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 FSD2A1L4K1 749 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 SFSWAPQ12872 951 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 GOLGA1Q92805 767 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 PCMTD1Q96MG8 357 aaPredicted RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 RDH13Q8NBN7 331 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MSANTD4Q8NCY6 345 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CCDC171Q6TFL3 1326 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MAP3K7O43318 606 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 ZRSR2Q15696 482 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 LUC7LQ9NQ29 371 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 FOXO3O43524 673 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 UTP14CQ5TAP6 766 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 GOPCQ9HD26 462 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 OFD1O75665 1012 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CDKL5O76039 1030 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 USP14P54578 494 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MAP3K12Q12852 859 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 PEAK1Q9H792 1746 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CCDC146Q8IYE0 955 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CHAMP1Q96JM3 812 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 PRDM5Q9NQX1 630 aaPredicted RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 ARHGAP31Q2M1Z3 1444 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 DPYDQ12882 1025 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MYH6P13533 1939 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 PHRF1Q9P1Y6 1649 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 CRB1P82279 1406 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 ADAMTSL3P82987 1691 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 TBC1D9Q6ZT07 1266 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 MICALL1Q8N3F8 863 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 ATP6V1DQ9Y5K8 247 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 PRMT3O60678 531 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 LDHAL6AQ6ZMR3 332 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CASZ1Q86V15 1759 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 USP19O94966 1318 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CNTROBQ8N137 903 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 CCDC136Q96JN2 1154 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 RGPD8O14715 1765 aaPredicted RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 CDR1P51861 262 aa3.92□□□□□ -1.78
LPP-220ENST00000617246 DZIP1LQ8IYY4 767 aaKnown RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 BMP2KQ9NSY1 1161 aaPredicted RBP3.92□□□□□ -1.78
LPP-220ENST00000617246 MYH11P35749 1972 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 NCOA3Q9Y6Q9 1424 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 POLR3AO14802 1390 aaPredicted RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 HSP90AB2PQ58FF8 381 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CCDC83Q8IWF9 413 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 TRMT44Q8IYL2 757 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 ZW10O43264 779 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 COPB2P35606 906 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 ANKRD45Q5TZF3 282 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 LMBRD2Q68DH5 695 aaPredicted RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 DZIP3Q86Y13 1208 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 SRCIN1Q9C0H9 1055 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 PAPPAQ13219 1627 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 LAMB4A4D0S4 1761 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 SMC2O95347 1197 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CBX1P83916 185 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 HOOK3Q86VS8 718 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 IRF2BPLQ9H1B7 796 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 ABCF2Q9UG63 623 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 ANKRD62A6NC57 917 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CCDC77Q9BR77 488 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 TBC1D2Q9BYX2 928 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 NIP7Q9Y221 180 aaKnown RBP eCLIP3.91□□□□□ -1.78
LPP-220ENST00000617246 INF2Q27J81 1249 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 GABPB2Q8TAK5 448 aaPredicted RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 ZHX3Q9H4I2 956 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 NUP153P49790 1475 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 NAP1L1P55209 391 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 CRNKL1Q9BZJ0 848 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 SRPRBQ9Y5M8 271 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 DMWDQ09019 674 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 NACA2Q9H009 215 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 AP5M1Q9H0R1 490 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 TRIM37O94972 964 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CAPN2P17655 700 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 EIF3DO15371 548 aaKnown RBP eCLIP3.91□□□□□ -1.78
LPP-220ENST00000617246 STIM1Q13586 685 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 GOLGA6L1Q8N7Z2 621 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 MTMR7Q9Y216 660 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 ZNF335Q9H4Z2 1342 aaPredicted RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 SLC8A3P57103 927 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 DLGAP5Q15398 846 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CD2APQ9Y5K6 639 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 CLASRPQ8N2M8 674 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 MPNDQ8N594 471 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 DDX11Q96FC9 970 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 TCP11L1Q9NUJ3 509 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 M0R2C6 588 aa3.91□□□□□ -1.78
LPP-220ENST00000617246 IFIT5Q13325 482 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 SYMPKQ92797 1274 aaKnown RBP3.91□□□□□ -1.78
LPP-220ENST00000617246 DDX10Q13206 875 aaKnown RBP3.9□□□□□ -1.78
LPP-220ENST00000617246 IQCA1Q86XH1 822 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 FRMD3A2A2Y4 597 aa3.9□□□□□ -1.78
LPP-220ENST00000617246 GNAT1P11488 350 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms