RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 OGFRQ9NZT2 677 aa28.28■■■□□ 2.12
GTF2IP1-204ENST00000616377 A0A087WWV3 80 aa28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 CCAR1Q8IX12 1150 aaKnown RBP28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 FER1L4A9Z1Z3 1794 aa28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 MRC1P22897 1456 aa28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 MRFAP1L1Q96HT8 127 aa28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 ZNF609O15014 1411 aa28.27■■■□□ 2.12
GTF2IP1-204ENST00000616377 ATP5JP18859 108 aa28.26■■■□□ 2.12
GTF2IP1-204ENST00000616377 SMARCC2Q8TAQ2 1214 aa28.26■■■□□ 2.12
GTF2IP1-204ENST00000616377 STX1AQ16623 288 aa28.26■■■□□ 2.11
GTF2IP1-204ENST00000616377 NEURL1BA8MQ27 555 aa28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 NCAPD2Q15021 1401 aa28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 KIF20AO95235 890 aa28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 RBM6P78332 1123 aaKnown RBP28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 RCOR1Q9UKL0 485 aa28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 USP16Q9Y5T5 823 aa28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 U3KPZ7 1027 aaPredicted RBP28.25■■■□□ 2.11
GTF2IP1-204ENST00000616377 SNW1Q13573 536 aaKnown RBP28.24■■■□□ 2.11
GTF2IP1-204ENST00000616377 GCKRQ14397 625 aa28.24■■■□□ 2.11
GTF2IP1-204ENST00000616377 STOX1Q6ZVD7 989 aa28.24■■■□□ 2.11
GTF2IP1-204ENST00000616377 CGNQ9P2M7 1197 aaKnown RBP28.24■■■□□ 2.11
GTF2IP1-204ENST00000616377 TFCP2Q12800 502 aa28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 TNNI3KQ59H18 835 aa28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 NSUN7Q8NE18 718 aaKnown RBP28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 DNAJC2Q99543 621 aaKnown RBP28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 FPGT-TNNI3KV9GXZ4 949 aa28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 MYL6BP14649 208 aa28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 DHX40Q8IX18 779 aaKnown RBP28.23■■■□□ 2.11
GTF2IP1-204ENST00000616377 CTAGE5O15320 804 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 SKILP12757 684 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 FGD1P98174 961 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 KCNH5Q8NCM2 988 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 PFKFB2O60825 505 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 CTDNEP1O95476 244 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 USP28Q96RU2 1077 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 MYD88Q99836 296 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 BECN2A8MW95 431 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 FILIP1Q7Z7B0 1213 aa28.22■■■□□ 2.11
GTF2IP1-204ENST00000616377 OVOS2A0A0G2JMS6 1433 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 NEMFO60524 1076 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 NEXNQ0ZGT2 675 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 MCMDC2Q4G0Z9 681 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 NYAP1Q6ZVC0 841 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 LLPHQ9BRT6 129 aaKnown RBP28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 COPRSQ9NQ92 184 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 DDX41Q9UJV9 622 aaKnown RBP28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 CCDC69A6NI79 296 aa28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 NAA16Q6N069 864 aaPredicted RBP28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 THEMISQ8N1K5 641 aaPredicted RBP28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 RBM33Q96EV2 1170 aaKnown RBP28.21■■■□□ 2.11
GTF2IP1-204ENST00000616377 RFX5P48382 616 aaPredicted RBP28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCZ1BP86790 482 aa28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCZ1P86791 482 aaPredicted RBP28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 PTPN12Q05209 780 aaKnown RBP28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 ERCC4Q92889 916 aaPredicted RBP28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 PTPN14Q15678 1187 aa28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 DDX46Q7L014 1031 aaKnown RBP28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 ENGASEQ8NFI3 743 aa28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 XAGE3Q8WTP9 111 aa28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 DBNDD2Q9BQY9 259 aa28.2■■■□□ 2.1
GTF2IP1-204ENST00000616377 PTPDC1A2A3K4 754 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 PPFIA3O75145 1194 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 PSME1Q06323 249 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 SLC39A6Q13433 755 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCDC73Q6ZRK6 1079 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 APOBRQ0VD83 1088 aa28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 TRMT1Q9NXH9 659 aaKnown RBP28.19■■■□□ 2.1
GTF2IP1-204ENST00000616377 ZNF215Q9UL58 517 aaPredicted RBP28.18■■■□□ 2.1
GTF2IP1-204ENST00000616377 KINO60870 393 aaKnown RBP28.18■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCT2P78371 535 aaKnown RBP28.18■■■□□ 2.1
GTF2IP1-204ENST00000616377 COPS6Q7L5N1 327 aa28.18■■■□□ 2.1
GTF2IP1-204ENST00000616377 METTL22Q9BUU2 404 aaPredicted RBP28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 FAM160A1Q05DH4 1040 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 SLFNL1Q499Z3 407 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 DHX32Q7L7V1 743 aaKnown RBP28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 KIF18AQ8NI77 898 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 FBXW7Q969H0 707 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 HAUS7Q99871 368 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 ANO10Q9NW15 660 aa28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 V9GYY5 206 aaPredicted RBP28.17■■■□□ 2.1
GTF2IP1-204ENST00000616377 ANKRD24Q8TF21 1146 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 NCOA5Q9HCD5 579 aaKnown RBP28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 RFX7Q2KHR2 1363 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 GUCY1B3Q02153 619 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 AOPEPQ8N6M6 819 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 FSIP1Q8NA03 581 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 MYH15Q9Y2K3 1946 aa28.16■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCDC9Q9Y3X0 531 aaKnown RBP28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 SIPA1L3O60292 1781 aaPredicted RBP28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 ME1P48163 572 aa28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 ILDR1Q86SU0 546 aaPredicted RBP28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 CCAR2Q8N163 923 aaKnown RBP28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 MORC2Q9Y6X9 1032 aaPredicted RBP28.15■■■□□ 2.1
GTF2IP1-204ENST00000616377 ESCO1Q5FWF5 840 aa28.14■■■□□ 2.1
GTF2IP1-204ENST00000616377 ARHGEF25Q86VW2 580 aa28.14■■■□□ 2.1
GTF2IP1-204ENST00000616377 KMT5BQ4FZB7 885 aa28.14■■■□□ 2.09
GTF2IP1-204ENST00000616377 ZNF790Q6PG37 636 aa28.14■■■□□ 2.09
GTF2IP1-204ENST00000616377 A0A0G2JLW4 131 aa28.13■■■□□ 2.09
GTF2IP1-204ENST00000616377 GCP02774 474 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms