RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZFYVE16Q7Z3T8 1539 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 KNDC1Q76NI1 1749 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 SLC3A2P08195 630 aaKnown RBP7.75□□□□□ -1.17
LMO3-235ENST00000616247 CASQ1P31415 396 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 APOBRQ0VD83 1088 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 CWF19L2Q2TBE0 894 aaKnown RBP7.75□□□□□ -1.17
LMO3-235ENST00000616247 TM6SF1Q9BZW5 370 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 PUF60Q9UHX1 559 aaKnown RBP7.75□□□□□ -1.17
LMO3-235ENST00000616247 ADGRB1O14514 1584 aa7.75□□□□□ -1.17
LMO3-235ENST00000616247 MYO1CO00159 1063 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 UBASH3AP57075 661 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 SYNE3Q6ZMZ3 975 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 CCDC150Q8NCX0 1101 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 ORC3Q9UBD5 711 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 LCMT1Q9UIC8 334 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 AOX1Q06278 1338 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 TTC21AQ8NDW8 1320 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 ABCC3O15438 1527 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 CHGBP05060 677 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 TOP1P11387 765 aaKnown RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 ATP1A3P13637 1013 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 MARCKSP29966 332 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 CDC25BP30305 580 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 FAM160A1Q05DH4 1040 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 ARMCX5Q6P1M9 558 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 ZNF589Q86UQ0 364 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 PLEKHA4Q9H4M7 779 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 TLR7Q9NYK1 1049 aaKnown RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 H2AFXP16104 143 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 RESTQ13127 1097 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 TOB2Q14106 344 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 DHX40Q8IX18 779 aaKnown RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 CPLX3Q8WVH0 158 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 MRPS27Q92552 414 aaKnown RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 EYA1Q99502 592 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 ZSCAN16Q9H4T2 348 aaPredicted RBP7.74□□□□□ -1.17
LMO3-235ENST00000616247 GLI2P10070 1586 aa7.74□□□□□ -1.17
LMO3-235ENST00000616247 PTPDC1A2A3K4 754 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 FANCCQ00597 558 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 CCDC12Q8WUD4 166 aaPredicted RBP7.73□□□□□ -1.17
LMO3-235ENST00000616247 MAP4K1Q92918 833 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 POGZQ7Z3K3 1410 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 KIAA1210Q9ULL0 1709 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 HIP1O00291 1037 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 HSP90B2PQ58FF3 399 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 NOM1Q5C9Z4 860 aaKnown RBP7.73□□□□□ -1.17
LMO3-235ENST00000616247 SARM1Q6SZW1 724 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 DDX46Q7L014 1031 aaKnown RBP7.73□□□□□ -1.17
LMO3-235ENST00000616247 EAF2Q96CJ1 260 aaPredicted RBP7.73□□□□□ -1.17
LMO3-235ENST00000616247 DESI2Q9BSY9 194 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 TTC41PQ6P2S7 1318 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 CPLX1O14810 134 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 EPB41L2O43491 1005 aaKnown RBP7.73□□□□□ -1.17
LMO3-235ENST00000616247 NDUFA8P51970 172 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 NLRP6P59044 892 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 PPP2R3AQ06190 1150 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 NEUROD6Q96NK8 337 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 LZTFL1Q9NQ48 299 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 MAP3K2Q9Y2U5 619 aa7.73□□□□□ -1.17
LMO3-235ENST00000616247 CPSF1Q10570 1443 aaKnown RBP7.72□□□□□ -1.17
LMO3-235ENST00000616247 RHOXF2BP0C7M4 288 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 WWC2Q6AWC2 1192 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 RHOXF2Q9BQY4 288 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 RABEP2Q9H5N1 569 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 RRP15Q9Y3B9 282 aaKnown RBP7.72□□□□□ -1.17
LMO3-235ENST00000616247 CD163L1Q9NR16 1453 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 NRXN1Q9ULB1 1477 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 MROH2AA6NES4 1674 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ACEP12821 1306 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 CCP110O43303 1012 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ZSCAN12O43309 604 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 KCNQ3O43525 872 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ATP2B1P20020 1258 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 FAM193AP78312 1265 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 SCRN1Q12765 414 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 LRRFIP1Q32MZ4 808 aaKnown RBP7.72□□□□□ -1.17
LMO3-235ENST00000616247 TAF7LQ5H9L4 462 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 JAKMIP3Q5VZ66 844 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ERC1Q8IUD2 1116 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
LMO3-235ENST00000616247 GJB4Q9NTQ9 266 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 ADAM21Q9UKJ8 722 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 PCDHA7Q9UN72 937 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 TTC21BQ7Z4L5 1316 aa7.72□□□□□ -1.17
LMO3-235ENST00000616247 YEATS2Q9ULM3 1422 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 EFCAB6Q5THR3 1501 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 CAMSAP1Q5T5Y3 1602 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 SASH3O75995 380 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 ADKP55263 362 aaKnown RBP7.71□□□□□ -1.17
LMO3-235ENST00000616247 E2F4Q16254 413 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 OLFM4Q6UX06 510 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 NBPF11Q86T75 865 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 IL17REQ8NFR9 667 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 PARD6BQ9BYG5 372 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 PDE11AQ9HCR9 933 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 KIAA1468Q9P260 1216 aa7.71□□□□□ -1.17
LMO3-235ENST00000616247 PPRC1Q5VV67 1664 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms