RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 RPS12P25398 132 aaKnown RBP23.06■■□□□ 1.28
SMN2-213ENST00000614240 HHIPL1Q96JK4 782 aa23.06■■□□□ 1.28
SMN2-213ENST00000614240 CHMP4AQ9BY43 222 aa23.06■■□□□ 1.28
SMN2-213ENST00000614240 DDX58O95786 925 aaKnown RBP23.05■■□□□ 1.28
SMN2-213ENST00000614240 CCDC152Q4G0S7 254 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 CCDC191Q8NCU4 936 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 ABHD8Q96I13 439 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 SEC31BQ9NQW1 1179 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 KCNQ5Q9NR82 932 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 TSKSQ9UJT2 592 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
SMN2-213ENST00000614240 UFL1O94874 794 aa23.04■■□□□ 1.28
SMN2-213ENST00000614240 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
SMN2-213ENST00000614240 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
SMN2-213ENST00000614240 KRT26Q7Z3Y9 468 aa23.04■■□□□ 1.28
SMN2-213ENST00000614240 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
SMN2-213ENST00000614240 DCPSQ96C86 337 aaKnown RBP23.04■■□□□ 1.28
SMN2-213ENST00000614240 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
SMN2-213ENST00000614240 CA12O43570 354 aa23.03■■□□□ 1.28
SMN2-213ENST00000614240 PDE8AO60658 829 aa23.03■■□□□ 1.28
SMN2-213ENST00000614240 C8orf58Q8NAV2 365 aa23.03■■□□□ 1.28
SMN2-213ENST00000614240 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
SMN2-213ENST00000614240 GGA1Q9UJY5 639 aa23.03■■□□□ 1.28
SMN2-213ENST00000614240 HUNKP57058 714 aa23.02■■□□□ 1.28
SMN2-213ENST00000614240 METTL22Q9BUU2 404 aaPredicted RBP23.02■■□□□ 1.28
SMN2-213ENST00000614240 PODXL2Q9NZ53 605 aa23.02■■□□□ 1.28
SMN2-213ENST00000614240 THSD7BQ9C0I4 1608 aa23.01■■□□□ 1.27
SMN2-213ENST00000614240 BRPF1P55201 1214 aaPredicted RBP23.01■■□□□ 1.27
SMN2-213ENST00000614240 DLK2Q6UY11 383 aa23.01■■□□□ 1.27
SMN2-213ENST00000614240 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SMN2-213ENST00000614240 EGFRP00533 1210 aa23■■□□□ 1.27
SMN2-213ENST00000614240 KIF4BQ2VIQ3 1234 aa23■■□□□ 1.27
SMN2-213ENST00000614240 ANKRD18AQ8IVF6 992 aa23■■□□□ 1.27
SMN2-213ENST00000614240 C2orf69Q8N8R5 385 aa23■■□□□ 1.27
SMN2-213ENST00000614240 VIL1P09327 827 aaKnown RBP22.99■■□□□ 1.27
SMN2-213ENST00000614240 NOGQ13253 232 aa22.99■■□□□ 1.27
SMN2-213ENST00000614240 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
SMN2-213ENST00000614240 COL4A1P02462 1669 aa22.99■■□□□ 1.27
SMN2-213ENST00000614240 ADM5C9JUS6 153 aa22.98■■□□□ 1.27
SMN2-213ENST00000614240 SULF1Q8IWU6 871 aa22.98■■□□□ 1.27
SMN2-213ENST00000614240 GBA2Q9HCG7 927 aaPredicted RBP22.98■■□□□ 1.27
SMN2-213ENST00000614240 CCDC85CA6NKD9 419 aa22.97■■□□□ 1.27
SMN2-213ENST00000614240 STK31Q9BXU1 1019 aa22.97■■□□□ 1.27
SMN2-213ENST00000614240 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 RGMBQ6NW40 437 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 TSPYL6Q8N831 410 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
SMN2-213ENST00000614240 GGA3Q9NZ52 723 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 XDHP47989 1333 aa22.96■■□□□ 1.27
SMN2-213ENST00000614240 ATP2B4P23634 1241 aa22.95■■□□□ 1.26
SMN2-213ENST00000614240 PI4KAP2A4QPH2 592 aa22.94■■□□□ 1.26
SMN2-213ENST00000614240 RSBN1LQ6PCB5 846 aaPredicted RBP22.94■■□□□ 1.26
SMN2-213ENST00000614240 PI4KAP1Q8N8J0 262 aa22.94■■□□□ 1.26
SMN2-213ENST00000614240 AGBL3Q8NEM8 1001 aa22.94■■□□□ 1.26
SMN2-213ENST00000614240 TSR2Q969E8 191 aaKnown RBP22.94■■□□□ 1.26
SMN2-213ENST00000614240 CCDC102AQ96A19 550 aa22.94■■□□□ 1.26
SMN2-213ENST00000614240 ZNF157P51786 506 aaPredicted RBP22.93■■□□□ 1.26
SMN2-213ENST00000614240 CTSWP56202 376 aa22.93■■□□□ 1.26
SMN2-213ENST00000614240 ZIC5Q96T25 663 aa22.93■■□□□ 1.26
SMN2-213ENST00000614240 ASTN2O75129 1339 aaPredicted RBP22.91■■□□□ 1.26
SMN2-213ENST00000614240 USP17L3A6NCW0 530 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 USP17L4A6NCW7 530 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 IGKV5-2P06315 115 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 USP17L8P0C7I0 530 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 ZNF280AP59817 542 aaPredicted RBP22.91■■□□□ 1.26
SMN2-213ENST00000614240 SCARF1Q14162 830 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 ANGEL2Q5VTE6 544 aaKnown RBP22.91■■□□□ 1.26
SMN2-213ENST00000614240 USP17L1Q7RTZ2 530 aa22.91■■□□□ 1.26
SMN2-213ENST00000614240 PODNQ7Z5L7 613 aa22.9■■□□□ 1.26
SMN2-213ENST00000614240 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
SMN2-213ENST00000614240 CDCA5Q96FF9 252 aa22.9■■□□□ 1.26
SMN2-213ENST00000614240 KIF23Q02241 960 aaPredicted RBP22.89■■□□□ 1.25
SMN2-213ENST00000614240 CWF19L2Q2TBE0 894 aaKnown RBP22.89■■□□□ 1.25
SMN2-213ENST00000614240 TWISTNBQ3B726 338 aaPredicted RBP22.89■■□□□ 1.25
SMN2-213ENST00000614240 MCOLN1Q9GZU1 580 aa22.89■■□□□ 1.25
SMN2-213ENST00000614240 GREM2Q9H772 168 aa22.89■■□□□ 1.25
SMN2-213ENST00000614240 BSDC1Q9NW68 430 aaPredicted RBP22.89■■□□□ 1.25
SMN2-213ENST00000614240 FAM155AB1AL88 458 aaPredicted RBP22.88■■□□□ 1.25
SMN2-213ENST00000614240 SLC4A2P04920 1241 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 DGKZQ13574 1117 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 FAM161AQ3B820 660 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 UBE3BQ7Z3V4 1068 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 FBXW7Q969H0 707 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 MYOZ2Q9NPC6 264 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 MINPP1Q9UNW1 487 aa22.88■■□□□ 1.25
SMN2-213ENST00000614240 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
SMN2-213ENST00000614240 IGHMBP2P38935 993 aaKnown RBP22.87■■□□□ 1.25
SMN2-213ENST00000614240 SCN9AQ15858 1988 aa22.87■■□□□ 1.25
SMN2-213ENST00000614240 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
SMN2-213ENST00000614240 G2E3Q7L622 706 aa22.86■■□□□ 1.25
SMN2-213ENST00000614240 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
SMN2-213ENST00000614240 GMLQ99445 158 aa22.86■■□□□ 1.25
SMN2-213ENST00000614240 POLR2AP24928 1970 aaKnown RBP22.85■■□□□ 1.25
SMN2-213ENST00000614240 WTIPA6NIX2 430 aaPredicted RBP22.85■■□□□ 1.25
SMN2-213ENST00000614240 H7C1W4 665 aa22.85■■□□□ 1.25
SMN2-213ENST00000614240 CCT4P50991 539 aaKnown RBP22.85■■□□□ 1.25
SMN2-213ENST00000614240 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
SMN2-213ENST00000614240 OGFOD1Q8N543 542 aa22.85■■□□□ 1.25
SMN2-213ENST00000614240 ZNF609O15014 1411 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms