RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 BRD1O95696 1058 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 CD44P16070 742 aaKnown RBP6.29□□□□□ -1.4
SYCP1-209ENST00000613524 EIF5P55010 431 aaKnown RBP6.29□□□□□ -1.4
SYCP1-209ENST00000613524 CTDSPL2Q05D32 466 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 PI4KAP1Q8N8J0 262 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 PRR7Q8TB68 274 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 BMP2KQ9NSY1 1161 aaPredicted RBP6.29□□□□□ -1.4
SYCP1-209ENST00000613524 CEMIPQ8WUJ3 1361 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 PKD1L3Q7Z443 1732 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 CHL1O00533 1208 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 SPIRE2Q8WWL2 714 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 NARFQ9UHQ1 456 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 PCDHGA10Q9Y5H3 936 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 C4BP0C0L5 1744 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 NCAPD2Q15021 1401 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 PLIN1O60240 522 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 RASSF7Q02833 373 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 GPR101Q96P66 508 aaPredicted RBP6.28□□□□□ -1.4
SYCP1-209ENST00000613524 SMC4Q9NTJ3 1288 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 MAP3K2Q9Y2U5 619 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 CAMTA2O94983 1202 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 SUSD4Q5VX71 490 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 TEX13AQ9BXU3 409 aaPredicted RBP6.28□□□□□ -1.4
SYCP1-209ENST00000613524 TNNQ9UQP3 1299 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 IL6STP40189 918 aaPredicted RBP6.28□□□□□ -1.4
SYCP1-209ENST00000613524 IRX6P78412 446 aaPredicted RBP6.28□□□□□ -1.4
SYCP1-209ENST00000613524 PRR5LQ6MZQ0 368 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 ANKRD13DQ6ZTN6 518 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 C3orf67Q6ZVT6 689 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 ZNF652Q9Y2D9 606 aa6.28□□□□□ -1.4
SYCP1-209ENST00000613524 SCN11AQ9UI33 1791 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 POLRMTO00411 1230 aaKnown RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 GALR2O43603 387 aaPredicted RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 ST5P78524 1137 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 TBC1D9Q6ZT07 1266 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 H0YIN7 160 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 HTATSF1O43719 755 aaKnown RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 BCAR3O75815 825 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 CALD1Q05682 793 aaKnown RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 PXYLP1Q8TE99 480 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 SLC16A10Q8TF71 515 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 DBF4Q9UBU7 674 aaPredicted RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 VIRMAQ69YN4 1812 aaKnown RBP6.27□□□□□ -1.41
SYCP1-209ENST00000613524 C5P01031 1676 aa6.27□□□□□ -1.41
SYCP1-209ENST00000613524 RC3H1Q5TC82 1133 aaKnown RBP6.26□□□□□ -1.41
SYCP1-209ENST00000613524 CCDC30Q5VVM6 783 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 C9orf131Q5VYM1 1079 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 SYMPKQ92797 1274 aaKnown RBP6.26□□□□□ -1.41
SYCP1-209ENST00000613524 TRIM34Q9BYJ4 488 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 JAG2Q9Y219 1238 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 KCPQ6ZWJ8 1503 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 SMAPO00193 183 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 RIMBP2O15034 1052 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 CLCN6P51797 869 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 MYH16Q9H6N6 1097 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 CENPFP49454 3210 aa6.26□□□□□ -1.41
SYCP1-209ENST00000613524 A0A087WZG4 1122 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 HSP90B1P14625 803 aaKnown RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 DALRD3Q5D0E6 543 aaKnown RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 ANO2Q9NQ90 1003 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 DDX21Q9NR30 783 aaKnown RBP eCLIP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 ZMIZ1Q9ULJ6 1067 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 MAP3K15Q6ZN16 1313 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 TUBGCP6Q96RT7 1819 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 SNAP23O00161 211 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 HELBQ8NG08 1087 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 ZNF277Q9NRM2 450 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 PIM2Q9P1W9 311 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 FAM198AQ9UFP1 575 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 CICQ96RK0 1608 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 NEXNQ0ZGT2 675 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 TMEM164Q5U3C3 297 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 SSH1Q8WYL5 1049 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
SYCP1-209ENST00000613524 C9orf78Q9NZ63 289 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-209ENST00000613524 WTIPA6NIX2 430 aaPredicted RBP6.24□□□□□ -1.41
SYCP1-209ENST00000613524 GRM1Q13255 1194 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 ZNF710Q8N1W2 664 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 GIPC2Q8TF65 315 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 UTP14AQ9BVJ6 771 aaKnown RBP6.24□□□□□ -1.41
SYCP1-209ENST00000613524 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
SYCP1-209ENST00000613524 ADGRG1Q9Y653 693 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 GJA3Q9Y6H8 435 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 ABCC12Q96J65 1359 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 C6orf229H3BNL8 230 aa6.24□□□□□ -1.41
SYCP1-209ENST00000613524 VAMP4O75379 141 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms