RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 CDR1P51861 262 aa16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 TMEM94Q12767 1356 aa16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
NDFIP2-205ENST00000612570 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 USP5P45974 858 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 SYT1P21579 422 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 IARSP41252 1262 aaKnown RBP16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 CBX1P83916 185 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 ISM2Q6H9L7 571 aa16.71■□□□□ 0.27
NDFIP2-205ENST00000612570 C16orf45Q96MC5 204 aaPredicted RBP16.71■□□□□ 0.26
NDFIP2-205ENST00000612570 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 CHST3Q7LGC8 479 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 TMX1Q9H3N1 280 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 PDCL2Q8N4E4 241 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 PKNOX2Q96KN3 472 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 UBXN4Q92575 508 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
NDFIP2-205ENST00000612570 ERCC4Q92889 916 aaPredicted RBP16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 DIP2CQ9Y2E4 1556 aa16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 NPHP4O75161 1426 aaPredicted RBP16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
NDFIP2-205ENST00000612570 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 SSRP1Q08945 709 aaKnown RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 CCDC181Q5TID7 509 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 HSPA4P34932 840 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 LEKR1Q6ZMV7 388 aa16.68■□□□□ 0.26
NDFIP2-205ENST00000612570 CTAGE5O15320 804 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 CCP110O43303 1012 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 TOM1O60784 492 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 DNA2P51530 1060 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 STIM1Q13586 685 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 EDC3Q96F86 508 aaKnown RBP16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 ZNF830Q96NB3 372 aaPredicted RBP16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 ZNF165P49910 485 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 URI1O94763 535 aaPredicted RBP16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 TMEM132AQ24JP5 1023 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 KDRP35968 1356 aa16.67■□□□□ 0.26
NDFIP2-205ENST00000612570 SLC27A2O14975 620 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 DTNBO60941 627 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 CCDC102AQ96A19 550 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 ERBB3P21860 1342 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 PRC1O43663 620 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 CYP7A1P22680 504 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 PTPRMP28827 1452 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 MED14O60244 1454 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 SEPT11Q9NVA2 429 aaKnown RBP16.66■□□□□ 0.26
NDFIP2-205ENST00000612570 ADCY5O95622 1261 aa16.65■□□□□ 0.26
NDFIP2-205ENST00000612570 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
NDFIP2-205ENST00000612570 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
NDFIP2-205ENST00000612570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms