RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 NEK1Q96PY6 1258 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 TMEM63CQ9P1W3 806 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 ERVV-1B6SEH8 477 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 GOLIM4O00461 696 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 PHF14O94880 888 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 IFIT5Q13325 482 aaKnown RBP28.35■■■□□ 2.13
HOXA4-204ENST00000610970 CCDC158Q5M9N0 1113 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 USP48Q86UV5 1035 aa28.35■■■□□ 2.13
HOXA4-204ENST00000610970 RTN4Q9NQC3 1192 aaKnown RBP28.35■■■□□ 2.13
HOXA4-204ENST00000610970 ZNF330Q9Y3S2 320 aaPredicted RBP28.34■■■□□ 2.13
HOXA4-204ENST00000610970 CHAMP1Q96JM3 812 aa28.33■■■□□ 2.13
HOXA4-204ENST00000610970 PPP1R9BQ96SB3 815 aa28.33■■■□□ 2.13
HOXA4-204ENST00000610970 THRAP3Q9Y2W1 955 aaKnown RBP28.33■■■□□ 2.13
HOXA4-204ENST00000610970 RNF113AO15541 343 aaKnown RBP28.32■■■□□ 2.12
HOXA4-204ENST00000610970 ST3GAL1Q11201 340 aa28.32■■■□□ 2.12
HOXA4-204ENST00000610970 TOB2Q14106 344 aaPredicted RBP28.32■■■□□ 2.12
HOXA4-204ENST00000610970 TAF7LQ5H9L4 462 aa28.32■■■□□ 2.12
HOXA4-204ENST00000610970 NLRP10Q86W26 655 aa28.32■■■□□ 2.12
HOXA4-204ENST00000610970 PUS3Q9BZE2 481 aaKnown RBP28.32■■■□□ 2.12
HOXA4-204ENST00000610970 MTMR6Q9Y217 621 aa28.32■■■□□ 2.12
HOXA4-204ENST00000610970 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.32■■■□□ 2.12
HOXA4-204ENST00000610970 RBM27Q9P2N5 1060 aaKnown RBP28.32■■■□□ 2.12
HOXA4-204ENST00000610970 NDUFB9Q9Y6M9 179 aa28.32■■■□□ 2.12
HOXA4-204ENST00000610970 ZFYP08048 801 aaPredicted RBP28.31■■■□□ 2.12
HOXA4-204ENST00000610970 IL6STP40189 918 aaPredicted RBP28.31■■■□□ 2.12
HOXA4-204ENST00000610970 FAM89AQ96GI7 184 aa28.31■■■□□ 2.12
HOXA4-204ENST00000610970 SEC62Q99442 399 aaKnown RBP28.29■■■□□ 2.12
HOXA4-204ENST00000610970 NSFL1CQ9UNZ2 370 aaKnown RBP28.29■■■□□ 2.12
HOXA4-204ENST00000610970 LETM1O95202 739 aaPredicted RBP28.29■■■□□ 2.12
HOXA4-204ENST00000610970 CYP21A2P08686 494 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 PRIM1P49642 420 aaKnown RBP28.29■■■□□ 2.12
HOXA4-204ENST00000610970 UBE2HP62256 183 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 TTC39AQ5SRH9 613 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 GORABQ5T7V8 394 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 CCDC129Q6ZRS4 1044 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 NECAB1Q8N987 351 aa28.29■■■□□ 2.12
HOXA4-204ENST00000610970 LARP1BQ659C4 914 aaKnown RBP28.28■■■□□ 2.12
HOXA4-204ENST00000610970 TRIM44Q96DX7 344 aaPredicted RBP28.28■■■□□ 2.12
HOXA4-204ENST00000610970 AK7Q96M32 723 aa28.28■■■□□ 2.12
HOXA4-204ENST00000610970 SLC4A9Q96Q91 983 aa28.28■■■□□ 2.12
HOXA4-204ENST00000610970 MYH3P11055 1940 aa28.27■■■□□ 2.12
HOXA4-204ENST00000610970 XAGE2Q96GT9 111 aa28.27■■■□□ 2.12
HOXA4-204ENST00000610970 TAF6LQ9Y6J9 622 aa28.27■■■□□ 2.12
HOXA4-204ENST00000610970 NUTM2BA6NNL0 878 aaPredicted RBP28.26■■■□□ 2.12
HOXA4-204ENST00000610970 NUTM2EB1AL46 878 aaPredicted RBP28.26■■■□□ 2.12
HOXA4-204ENST00000610970 HLFQ16534 295 aa28.26■■■□□ 2.12
HOXA4-204ENST00000610970 NUTM2AQ8IVF1 878 aaPredicted RBP28.26■■■□□ 2.12
HOXA4-204ENST00000610970 TTLL11Q8NHH1 800 aa28.26■■■□□ 2.12
HOXA4-204ENST00000610970 CHMP4CQ96CF2 233 aa28.26■■■□□ 2.12
HOXA4-204ENST00000610970 CNPY2Q9Y2B0 182 aa28.26■■■□□ 2.12
HOXA4-204ENST00000610970 TCHHQ07283 1943 aa28.26■■■□□ 2.11
HOXA4-204ENST00000610970 ANKRD18BA2A2Z9 1011 aa28.26■■■□□ 2.11
HOXA4-204ENST00000610970 ADAMTS2O95450 1211 aa28.26■■■□□ 2.11
HOXA4-204ENST00000610970 CTSWP56202 376 aa28.26■■■□□ 2.11
HOXA4-204ENST00000610970 ZNF512BQ96KM6 892 aaPredicted RBP28.26■■■□□ 2.11
HOXA4-204ENST00000610970 NUP98P52948 1817 aa28.26■■■□□ 2.11
HOXA4-204ENST00000610970 SPATA31A6Q5VVP1 1343 aa28.25■■■□□ 2.11
HOXA4-204ENST00000610970 SYCE3A1L190 88 aa28.25■■■□□ 2.11
HOXA4-204ENST00000610970 RBSNQ9H1K0 784 aa28.25■■■□□ 2.11
HOXA4-204ENST00000610970 ZBTB1Q9Y2K1 713 aa28.25■■■□□ 2.11
HOXA4-204ENST00000610970 CCDC9Q9Y3X0 531 aaKnown RBP28.25■■■□□ 2.11
HOXA4-204ENST00000610970 RIPOR2Q9Y4F9 1068 aa28.25■■■□□ 2.11
HOXA4-204ENST00000610970 DOT1LQ8TEK3 1739 aa28.24■■■□□ 2.11
HOXA4-204ENST00000610970 PDE8AO60658 829 aa28.24■■■□□ 2.11
HOXA4-204ENST00000610970 ILDR2Q71H61 639 aa28.24■■■□□ 2.11
HOXA4-204ENST00000610970 DHX32Q7L7V1 743 aaKnown RBP28.24■■■□□ 2.11
HOXA4-204ENST00000610970 GADD45BO75293 160 aaPredicted RBP28.23■■■□□ 2.11
HOXA4-204ENST00000610970 GTF3C6Q969F1 213 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 CTNNA3Q9UI47 895 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 NRAPQ86VF7 1730 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 MAST3O60307 1309 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 HSPD1P10809 573 aaKnown RBP28.23■■■□□ 2.11
HOXA4-204ENST00000610970 Q6ZUG5 572 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 LLPHQ9BRT6 129 aaKnown RBP28.23■■■□□ 2.11
HOXA4-204ENST00000610970 GDPD2Q9HCC8 539 aa28.23■■■□□ 2.11
HOXA4-204ENST00000610970 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 VPS37CA5D8V6 355 aaPredicted RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 IRS4O14654 1257 aaPredicted RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 ITGA6P23229 1130 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 ATP2B3Q16720 1220 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 FOXD4L6Q3SYB3 417 aaPredicted RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 CCDC183Q5T5S1 534 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 FOXD4L3Q6VB84 417 aaPredicted RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 LDHAL6AQ6ZMR3 332 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 DZIP3Q86Y13 1208 aaKnown RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 ZNF34Q8IZ26 560 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 TRMT112Q9UI30 125 aaKnown RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 CICQ96RK0 1608 aaPredicted RBP28.22■■■□□ 2.11
HOXA4-204ENST00000610970 RIC1Q4ADV7 1423 aa28.22■■■□□ 2.11
HOXA4-204ENST00000610970 METTL24Q5JXM2 366 aa28.21■■■□□ 2.11
HOXA4-204ENST00000610970 TSPY26PQ9H489 355 aa28.21■■■□□ 2.11
HOXA4-204ENST00000610970 GPTP24298 496 aa28.21■■■□□ 2.11
HOXA4-204ENST00000610970 SYTL4Q96C24 671 aaPredicted RBP28.21■■■□□ 2.11
HOXA4-204ENST00000610970 TCEANC2Q96MN5 208 aa28.21■■■□□ 2.11
HOXA4-204ENST00000610970 AGXT2Q9BYV1 514 aa28.21■■■□□ 2.11
HOXA4-204ENST00000610970 RGS17Q9UGC6 210 aaPredicted RBP28.21■■■□□ 2.11
HOXA4-204ENST00000610970 LAMA4Q16363 1823 aa28.2■■■□□ 2.1
HOXA4-204ENST00000610970 CHGBP05060 677 aa28.2■■■□□ 2.1
HOXA4-204ENST00000610970 FKBP4Q02790 459 aaKnown RBP eCLIP28.2■■■□□ 2.1
HOXA4-204ENST00000610970 COL9A3Q14050 684 aaPredicted RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms