RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 BECN2A8MW95 431 aa26.23■■□□□ 1.79
SHANK2-220ENST00000608988 ADD1P35611 737 aaKnown RBP26.23■■□□□ 1.79
SHANK2-220ENST00000608988 TLR7Q9NYK1 1049 aaKnown RBP26.23■■□□□ 1.79
SHANK2-220ENST00000608988 ADAMTS7Q9UKP4 1686 aa26.23■■□□□ 1.79
SHANK2-220ENST00000608988 Q6ZUG5 572 aa26.22■■□□□ 1.79
SHANK2-220ENST00000608988 CCAR1Q8IX12 1150 aaKnown RBP26.22■■□□□ 1.79
SHANK2-220ENST00000608988 KIF18AQ8NI77 898 aa26.22■■□□□ 1.79
SHANK2-220ENST00000608988 TAF6LQ9Y6J9 622 aa26.22■■□□□ 1.79
SHANK2-220ENST00000608988 COL15A1P39059 1388 aa26.22■■□□□ 1.79
SHANK2-220ENST00000608988 SKILP12757 684 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 HSP90B1P14625 803 aaKnown RBP26.21■■□□□ 1.79
SHANK2-220ENST00000608988 COL9A3Q14050 684 aaPredicted RBP26.21■■□□□ 1.79
SHANK2-220ENST00000608988 PROSER3Q2NL68 480 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 CEP57L1Q8IYX8 460 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 COPRSQ9NQ92 184 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 KINO60870 393 aaKnown RBP26.21■■□□□ 1.79
SHANK2-220ENST00000608988 FAM160A1Q05DH4 1040 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 C11orf57Q6ZUT1 292 aaPredicted RBP26.21■■□□□ 1.79
SHANK2-220ENST00000608988 CREBRFQ8IUR6 639 aa26.21■■□□□ 1.79
SHANK2-220ENST00000608988 KCNJ6P48051 423 aa26.2■■□□□ 1.78
SHANK2-220ENST00000608988 CCZ1BP86790 482 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 CCZ1P86791 482 aaPredicted RBP26.19■■□□□ 1.78
SHANK2-220ENST00000608988 NEXNQ0ZGT2 675 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 OSBPL5Q9H0X9 879 aaPredicted RBP26.19■■□□□ 1.78
SHANK2-220ENST00000608988 CAMTA1Q9Y6Y1 1673 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 CCDC69A6NI79 296 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 MCMDC2Q4G0Z9 681 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 MPRIPQ6WCQ1 1025 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 CCAR2Q8N163 923 aaKnown RBP26.19■■□□□ 1.78
SHANK2-220ENST00000608988 KRT222Q8N1A0 295 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 ENGASEQ8NFI3 743 aa26.19■■□□□ 1.78
SHANK2-220ENST00000608988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.19■■□□□ 1.78
SHANK2-220ENST00000608988 DHX40Q8IX18 779 aaKnown RBP26.18■■□□□ 1.78
SHANK2-220ENST00000608988 BPIFA3Q9BQP9 254 aa26.18■■□□□ 1.78
SHANK2-220ENST00000608988 FAM53CQ9NYF3 392 aa26.18■■□□□ 1.78
SHANK2-220ENST00000608988 SH3TC1Q8TE82 1336 aa26.17■■□□□ 1.78
SHANK2-220ENST00000608988 SCRN1Q12765 414 aa26.17■■□□□ 1.78
SHANK2-220ENST00000608988 SNW1Q13573 536 aaKnown RBP26.17■■□□□ 1.78
SHANK2-220ENST00000608988 NSUN7Q8NE18 718 aaKnown RBP26.17■■□□□ 1.78
SHANK2-220ENST00000608988 AGXT2Q9BYV1 514 aa26.17■■□□□ 1.78
SHANK2-220ENST00000608988 PHF8Q9UPP1 1060 aa26.17■■□□□ 1.78
SHANK2-220ENST00000608988 ZNF609O15014 1411 aa26.16■■□□□ 1.78
SHANK2-220ENST00000608988 SLU7O95391 586 aaKnown RBP26.16■■□□□ 1.78
SHANK2-220ENST00000608988 DHX32Q7L7V1 743 aaKnown RBP26.16■■□□□ 1.78
SHANK2-220ENST00000608988 RGPD2P0DJD1 1756 aa26.16■■□□□ 1.78
SHANK2-220ENST00000608988 ZNF771Q7L3S4 317 aaPredicted RBP26.15■■□□□ 1.78
SHANK2-220ENST00000608988 CCDC150Q8NCX0 1101 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 HAUS7Q99871 368 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 PXDNQ92626 1479 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 IGKV5-2P06315 115 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 TNNI3KQ59H18 835 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 THEMISQ8N1K5 641 aaPredicted RBP26.15■■□□□ 1.78
SHANK2-220ENST00000608988 ZNF592Q92610 1267 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 GOLPH3LQ9H4A5 285 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 FPGT-TNNI3KV9GXZ4 949 aa26.15■■□□□ 1.78
SHANK2-220ENST00000608988 ABCC6O95255 1503 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 A0A1W2PQ27 194 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 A0A1W2PQ64 194 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 A0A1W2PQD8 194 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 NEURL1BA8MQ27 555 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 CYP21A2P08686 494 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 GCKRQ14397 625 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 SIL1Q9H173 461 aa26.14■■□□□ 1.78
SHANK2-220ENST00000608988 FGD1P98174 961 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 RIC3Q7Z5B4 369 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 DDX11Q96FC9 970 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 ZNF215Q9UL58 517 aaPredicted RBP26.13■■□□□ 1.77
SHANK2-220ENST00000608988 SALL1Q9NSC2 1324 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 PSDA5PKW4 1024 aaPredicted RBP26.13■■□□□ 1.77
SHANK2-220ENST00000608988 NRDCO43847 1150 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 PDIA6Q15084 440 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 DSCC1Q9BVC3 393 aa26.13■■□□□ 1.77
SHANK2-220ENST00000608988 DBNLQ9UJU6 430 aaKnown RBP26.13■■□□□ 1.77
SHANK2-220ENST00000608988 SLIT3O75094 1523 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 PALLDQ8WX93 1383 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 PTPDC1A2A3K4 754 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 SLFN14P0C7P3 912 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 C14orf37Q86TY3 774 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 METTL22Q9BUU2 404 aaPredicted RBP26.12■■□□□ 1.77
SHANK2-220ENST00000608988 HELLSQ9NRZ9 838 aa26.12■■□□□ 1.77
SHANK2-220ENST00000608988 USP27XA6NNY8 438 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 FBXL16Q8N461 479 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 FSIP1Q8NA03 581 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 MRPS27Q92552 414 aaKnown RBP26.11■■□□□ 1.77
SHANK2-220ENST00000608988 ZNF274Q96GC6 653 aaPredicted RBP26.11■■□□□ 1.77
SHANK2-220ENST00000608988 RFX5P48382 616 aaPredicted RBP26.11■■□□□ 1.77
SHANK2-220ENST00000608988 EXOSC10Q01780 885 aaKnown RBP26.11■■□□□ 1.77
SHANK2-220ENST00000608988 KMT5BQ4FZB7 885 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 RGS22Q8NE09 1264 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 USP28Q96RU2 1077 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 L2HGDHQ9H9P8 463 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 RTEL1Q9NZ71 1219 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 USP16Q9Y5T5 823 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 LAMA4Q16363 1823 aa26.11■■□□□ 1.77
SHANK2-220ENST00000608988 CCP110O43303 1012 aa26.1■■□□□ 1.77
SHANK2-220ENST00000608988 TPM4P67936 248 aa26.1■■□□□ 1.77
SHANK2-220ENST00000608988 RABL6Q3YEC7 729 aaPredicted RBP26.1■■□□□ 1.77
SHANK2-220ENST00000608988 FMR1NBQ8N0W7 255 aaPredicted RBP26.1■■□□□ 1.77
SHANK2-220ENST00000608988 CTDNEP1O95476 244 aa26.09■■□□□ 1.77
SHANK2-220ENST00000608988 ADALQ6DHV7 355 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms