RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 EGFRP00533 1210 aa28.15■■■□□ 2.1
TMEM248-207ENST00000607045 PI4KAP1Q8N8J0 262 aa28.15■■■□□ 2.1
TMEM248-207ENST00000607045 EYA3Q99504 573 aa28.15■■■□□ 2.1
TMEM248-207ENST00000607045 IGKV5-2P06315 115 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 HSP90B1P14625 803 aaKnown RBP28.14■■■□□ 2.1
TMEM248-207ENST00000607045 MAP2K1Q02750 393 aaPredicted RBP28.14■■■□□ 2.1
TMEM248-207ENST00000607045 CCDC152Q4G0S7 254 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 KSR2Q6VAB6 950 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 CDC37L1Q7L3B6 337 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 USP48Q86UV5 1035 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 WWC1Q8IX03 1113 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 ZC3H12CQ9C0D7 883 aaKnown RBP28.14■■■□□ 2.1
TMEM248-207ENST00000607045 PODXL2Q9NZ53 605 aa28.14■■■□□ 2.1
TMEM248-207ENST00000607045 RTL9Q8NET4 1388 aa28.13■■■□□ 2.09
TMEM248-207ENST00000607045 TBC1D10BQ4KMP7 808 aaPredicted RBP28.13■■■□□ 2.09
TMEM248-207ENST00000607045 RBM26Q5T8P6 1007 aaKnown RBP28.13■■■□□ 2.09
TMEM248-207ENST00000607045 G2E3Q7L622 706 aa28.13■■■□□ 2.09
TMEM248-207ENST00000607045 SAPCD2Q86UD0 394 aa28.13■■■□□ 2.09
TMEM248-207ENST00000607045 CHMP4AQ9BY43 222 aa28.13■■■□□ 2.09
TMEM248-207ENST00000607045 ANKIB1Q9P2G1 1089 aa28.13■■■□□ 2.09
TMEM248-207ENST00000607045 LRRC37AA6NMS7 1700 aa28.12■■■□□ 2.09
TMEM248-207ENST00000607045 AOC2O75106 756 aa28.12■■■□□ 2.09
TMEM248-207ENST00000607045 HSPA8P11142 646 aaKnown RBP28.12■■■□□ 2.09
TMEM248-207ENST00000607045 ECE1P42892 770 aa28.12■■■□□ 2.09
TMEM248-207ENST00000607045 ZNF408Q9H9D4 720 aa28.12■■■□□ 2.09
TMEM248-207ENST00000607045 UFL1O94874 794 aa28.11■■■□□ 2.09
TMEM248-207ENST00000607045 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
TMEM248-207ENST00000607045 WTIPA6NIX2 430 aaPredicted RBP28.1■■■□□ 2.09
TMEM248-207ENST00000607045 GGA1Q9UJY5 639 aa28.1■■■□□ 2.09
TMEM248-207ENST00000607045 SLC4A2P04920 1241 aa28.08■■■□□ 2.09
TMEM248-207ENST00000607045 VIL1P09327 827 aaKnown RBP28.08■■■□□ 2.09
TMEM248-207ENST00000607045 CWF19L2Q2TBE0 894 aaKnown RBP28.08■■■□□ 2.09
TMEM248-207ENST00000607045 TWISTNBQ3B726 338 aaPredicted RBP28.08■■■□□ 2.09
TMEM248-207ENST00000607045 STK31Q9BXU1 1019 aa28.08■■■□□ 2.09
TMEM248-207ENST00000607045 RPS12P25398 132 aaKnown RBP28.07■■■□□ 2.08
TMEM248-207ENST00000607045 ANKRD18AQ8IVF6 992 aa28.07■■■□□ 2.08
TMEM248-207ENST00000607045 TTLL11Q8NHH1 800 aa28.07■■■□□ 2.08
TMEM248-207ENST00000607045 TRPM7Q96QT4 1865 aa28.06■■■□□ 2.08
TMEM248-207ENST00000607045 G3V3G9 751 aa28.06■■■□□ 2.08
TMEM248-207ENST00000607045 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
TMEM248-207ENST00000607045 DCAF8Q5TAQ9 597 aa28.06■■■□□ 2.08
TMEM248-207ENST00000607045 SALL2Q9Y467 1007 aaPredicted RBP28.06■■■□□ 2.08
TMEM248-207ENST00000607045 CTSWP56202 376 aa28.05■■■□□ 2.08
TMEM248-207ENST00000607045 NEURL1BA8MQ27 555 aa28.04■■■□□ 2.08
TMEM248-207ENST00000607045 MAP2K2P36507 400 aa28.04■■■□□ 2.08
TMEM248-207ENST00000607045 NEXNQ0ZGT2 675 aa28.04■■■□□ 2.08
TMEM248-207ENST00000607045 KRT26Q7Z3Y9 468 aa28.04■■■□□ 2.08
TMEM248-207ENST00000607045 GREM2Q9H772 168 aa28.04■■■□□ 2.08
TMEM248-207ENST00000607045 H7C1W4 665 aa28.03■■■□□ 2.08
TMEM248-207ENST00000607045 HHIPL1Q96JK4 782 aa28.03■■■□□ 2.08
TMEM248-207ENST00000607045 MRS2Q9HD23 443 aa28.03■■■□□ 2.08
TMEM248-207ENST00000607045 TSKSQ9UJT2 592 aa28.03■■■□□ 2.08
TMEM248-207ENST00000607045 ASTN2O75129 1339 aaPredicted RBP28.02■■■□□ 2.08
TMEM248-207ENST00000607045 XDHP47989 1333 aa28.02■■■□□ 2.08
TMEM248-207ENST00000607045 BEGAINQ9BUH8 593 aa28.02■■■□□ 2.08
TMEM248-207ENST00000607045 MINPP1Q9UNW1 487 aa28.02■■■□□ 2.08
TMEM248-207ENST00000607045 IL16Q14005 1332 aa28.01■■■□□ 2.07
TMEM248-207ENST00000607045 ADM5C9JUS6 153 aa28.01■■■□□ 2.07
TMEM248-207ENST00000607045 ATP2B4P23634 1241 aa28.01■■■□□ 2.07
TMEM248-207ENST00000607045 DCPSQ96C86 337 aaKnown RBP28.01■■■□□ 2.07
TMEM248-207ENST00000607045 ZIC5Q96T25 663 aa28.01■■■□□ 2.07
TMEM248-207ENST00000607045 CDC5LQ99459 802 aaKnown RBP28.01■■■□□ 2.07
TMEM248-207ENST00000607045 KIF4BQ2VIQ3 1234 aa28■■■□□ 2.07
TMEM248-207ENST00000607045 RSBN1LQ6PCB5 846 aaPredicted RBP28■■■□□ 2.07
TMEM248-207ENST00000607045 UBE3BQ7Z3V4 1068 aa28■■■□□ 2.07
TMEM248-207ENST00000607045 BSDC1Q9NW68 430 aaPredicted RBP28■■■□□ 2.07
TMEM248-207ENST00000607045 SCN9AQ15858 1988 aa27.99■■■□□ 2.07
TMEM248-207ENST00000607045 HUNKP57058 714 aa27.99■■■□□ 2.07
TMEM248-207ENST00000607045 VAMP4O75379 141 aa27.98■■■□□ 2.07
TMEM248-207ENST00000607045 FLIIQ13045 1269 aa27.98■■■□□ 2.07
TMEM248-207ENST00000607045 GCKRQ14397 625 aa27.98■■■□□ 2.07
TMEM248-207ENST00000607045 NCBP3Q53F19 620 aaKnown RBP27.98■■■□□ 2.07
TMEM248-207ENST00000607045 GMLQ99445 158 aa27.98■■■□□ 2.07
TMEM248-207ENST00000607045 POLR2AP24928 1970 aaKnown RBP27.97■■■□□ 2.07
TMEM248-207ENST00000607045 ZNF280AP59817 542 aaPredicted RBP27.97■■■□□ 2.07
TMEM248-207ENST00000607045 SCARF1Q14162 830 aa27.97■■■□□ 2.07
TMEM248-207ENST00000607045 AGBL3Q8NEM8 1001 aa27.97■■■□□ 2.07
TMEM248-207ENST00000607045 FANCIQ9NVI1 1328 aa27.96■■■□□ 2.07
TMEM248-207ENST00000607045 PODNQ7Z5L7 613 aa27.96■■■□□ 2.07
TMEM248-207ENST00000607045 USP17L3A6NCW0 530 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 USP17L4A6NCW7 530 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 ANP32CO43423 234 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 CASP7P55210 303 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 EXOSC9Q06265 439 aaKnown RBP27.95■■■□□ 2.06
TMEM248-207ENST00000607045 FKBP5Q13451 457 aaPredicted RBP27.95■■■□□ 2.06
TMEM248-207ENST00000607045 USP17L1Q7RTZ2 530 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 GBA2Q9HCG7 927 aaPredicted RBP27.95■■■□□ 2.06
TMEM248-207ENST00000607045 GGA3Q9NZ52 723 aa27.95■■■□□ 2.06
TMEM248-207ENST00000607045 CCT4P50991 539 aaKnown RBP27.94■■■□□ 2.06
TMEM248-207ENST00000607045 TXNRD3Q86VQ6 643 aa27.94■■■□□ 2.06
TMEM248-207ENST00000607045 WDR63Q8IWG1 891 aa27.94■■■□□ 2.06
TMEM248-207ENST00000607045 C2orf69Q8N8R5 385 aa27.94■■■□□ 2.06
TMEM248-207ENST00000607045 DNAAF4Q8WXU2 420 aa27.94■■■□□ 2.06
TMEM248-207ENST00000607045 MXD3Q9BW11 206 aa27.94■■■□□ 2.06
TMEM248-207ENST00000607045 SPINK5Q9NQ38 1064 aaPredicted RBP27.94■■■□□ 2.06
TMEM248-207ENST00000607045 ZNF316A6NFI3 1004 aaPredicted RBP27.93■■■□□ 2.06
TMEM248-207ENST00000607045 USP17L8P0C7I0 530 aa27.93■■■□□ 2.06
TMEM248-207ENST00000607045 PLA2G12BQ9BX93 195 aa27.93■■■□□ 2.06
TMEM248-207ENST00000607045 CSF1RP07333 972 aa27.92■■■□□ 2.06
TMEM248-207ENST00000607045 BRPF1P55201 1214 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms