RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NXPE4Q6UWF7 544 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 C1orf127Q8N9H9 656 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 DHX38Q92620 1227 aaKnown RBP7.75□□□□□ -1.17
LINC00397-202ENST00000606785 PMEPA1Q969W9 287 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 SPATA32Q96LK8 384 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 CEP63Q96MT8 703 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 BCO2Q9BYV7 579 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 ABI2Q9NYB9 513 aaPredicted RBP7.75□□□□□ -1.17
LINC00397-202ENST00000606785 GJA3Q9Y6H8 435 aa7.75□□□□□ -1.17
LINC00397-202ENST00000606785 EREGO14944 169 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
LINC00397-202ENST00000606785 ARHGEF15O94989 841 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 HSP90B1P14625 803 aaKnown RBP7.74□□□□□ -1.17
LINC00397-202ENST00000606785 RHOQP17081 205 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 DNAJC2Q99543 621 aaKnown RBP7.74□□□□□ -1.17
LINC00397-202ENST00000606785 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 SUV39H2Q9H5I1 410 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
LINC00397-202ENST00000606785 CNTN3Q9P232 1028 aa7.74□□□□□ -1.17
LINC00397-202ENST00000606785 GTF2F1P35269 517 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00397-202ENST00000606785 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 GRM2Q14416 872 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 SAMD5Q5TGI4 173 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 ERMP1Q7Z2K6 904 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 SCARF2Q96GP6 870 aaPredicted RBP7.72□□□□□ -1.17
LINC00397-202ENST00000606785 LNPKQ9C0E8 428 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 BRD7Q9NPI1 651 aa7.72□□□□□ -1.17
LINC00397-202ENST00000606785 CES1P23141 567 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 GSTT1P30711 240 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 GJA8P48165 433 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 PTSQ03393 145 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 RNFT1Q5M7Z0 435 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 TTC39BQ5VTQ0 682 aaPredicted RBP7.71□□□□□ -1.18
LINC00397-202ENST00000606785 NLRP8Q86W28 1048 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
LINC00397-202ENST00000606785 GPAMQ9HCL2 828 aa7.71□□□□□ -1.18
LINC00397-202ENST00000606785 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 PGBD3Q8N328 593 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 RUBCNLQ9H714 662 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 TRAK1Q9UPV9 953 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 DYRK1BQ9Y463 629 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 CADPSQ9ULU8 1353 aa7.7□□□□□ -1.18
LINC00397-202ENST00000606785 F11P03951 625 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 EDN3P14138 238 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 KCNQ4P56696 695 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 RBL2Q08999 1139 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 NOP9Q86U38 636 aaKnown RBP7.69□□□□□ -1.18
LINC00397-202ENST00000606785 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 ZCCHC2Q9C0B9 1178 aaKnown RBP7.69□□□□□ -1.18
LINC00397-202ENST00000606785 EHD4Q9H223 541 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 COPRSQ9NQ92 184 aa7.69□□□□□ -1.18
LINC00397-202ENST00000606785 A0A1W2PP55 124 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 ADAM23O75077 832 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 FGRP09769 529 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 PAK2Q13177 524 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 GIMAP6Q6P9H5 292 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 MCF2L2Q86YR7 1114 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 CCDC155Q8N6L0 562 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 GPRASP2Q96D09 838 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 RSRP1Q9BUV0 290 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 TTF2Q9UNY4 1162 aaKnown RBP7.68□□□□□ -1.18
LINC00397-202ENST00000606785 KCNH4Q9UQ05 1017 aa7.68□□□□□ -1.18
LINC00397-202ENST00000606785 CYP2E1P05181 493 aaPredicted RBP7.67□□□□□ -1.18
LINC00397-202ENST00000606785 ATF4P18848 351 aaPredicted RBP7.67□□□□□ -1.18
LINC00397-202ENST00000606785 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
LINC00397-202ENST00000606785 SOGA3Q5TF21 947 aa7.67□□□□□ -1.18
LINC00397-202ENST00000606785 PEAR1Q5VY43 1037 aaPredicted RBP7.67□□□□□ -1.18
LINC00397-202ENST00000606785 PRPF40BQ6NWY9 871 aaKnown RBP7.67□□□□□ -1.18
LINC00397-202ENST00000606785 C3orf58Q8NDZ4 430 aa7.67□□□□□ -1.18
LINC00397-202ENST00000606785 OR13H1Q8NG92 308 aa7.67□□□□□ -1.18
LINC00397-202ENST00000606785 HIRIP3Q9BW71 556 aaPredicted RBP7.67□□□□□ -1.18
LINC00397-202ENST00000606785 KBTBD4Q9NVX7 518 aa7.67□□□□□ -1.18
LINC00397-202ENST00000606785 PHF20L1A8MW92 1017 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 SASH3O75995 380 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 FAM157BP0CG42 384 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 PWP1Q13610 501 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 CCINQ13939 588 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
LINC00397-202ENST00000606785 CCDC144BQ3MJ40 725 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 RASGRP4Q8TDF6 673 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 ANKRD24Q8TF21 1146 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
LINC00397-202ENST00000606785 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.18
LINC00397-202ENST00000606785 LATS2Q9NRM7 1088 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 KANSL3Q9P2N6 904 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 PPM1HQ9ULR3 514 aa7.66□□□□□ -1.18
LINC00397-202ENST00000606785 SLC35F4A4IF30 521 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 MSTNO14793 375 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 MMP20O60882 483 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 STK10O94804 968 aaKnown RBP7.65□□□□□ -1.18
LINC00397-202ENST00000606785 XRCC5P13010 732 aaKnown RBP7.65□□□□□ -1.18
LINC00397-202ENST00000606785 TARSP26639 723 aaKnown RBP7.65□□□□□ -1.18
LINC00397-202ENST00000606785 FCGRTP55899 365 aa7.65□□□□□ -1.18
LINC00397-202ENST00000606785 CCDC85BQ15834 202 aaPredicted RBP7.65□□□□□ -1.18
LINC00397-202ENST00000606785 FIGNL1Q6PIW4 674 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms