RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 CELF1Q92879 486 aaKnown RBP22.82■■□□□ 1.24
SSBP4-212ENST00000601919 ATF5Q9Y2D1 282 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-212ENST00000601919 SRGNP10124 158 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 ALDH1B1P30837 517 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 TNNI3KQ59H18 835 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 SKAP1Q86WV1 359 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 C16orf71Q8IYS4 520 aaPredicted RBP22.81■■□□□ 1.24
SSBP4-212ENST00000601919 MASTLQ96GX5 879 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 FPGT-TNNI3KV9GXZ4 949 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 C10orf71Q711Q0 1435 aa22.81■■□□□ 1.24
SSBP4-212ENST00000601919 PDE8BO95263 885 aa22.8■■□□□ 1.24
SSBP4-212ENST00000601919 MX1P20591 662 aa22.8■■□□□ 1.24
SSBP4-212ENST00000601919 C2CD5Q86YS7 1000 aa22.8■■□□□ 1.24
SSBP4-212ENST00000601919 PLEKHM2Q8IWE5 1019 aa22.8■■□□□ 1.24
SSBP4-212ENST00000601919 AOX1Q06278 1338 aa22.8■■□□□ 1.24
SSBP4-212ENST00000601919 STYK1Q6J9G0 422 aa22.79■■□□□ 1.24
SSBP4-212ENST00000601919 EAF2Q96CJ1 260 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-212ENST00000601919 ANKRD2Q9GZV1 360 aa22.79■■□□□ 1.24
SSBP4-212ENST00000601919 OSBPL3Q9H4L5 887 aa22.79■■□□□ 1.24
SSBP4-212ENST00000601919 KIF13BQ9NQT8 1826 aa22.79■■□□□ 1.24
SSBP4-212ENST00000601919 ZNF609O15014 1411 aa22.78■■□□□ 1.24
SSBP4-212ENST00000601919 COL11A2P13942 1736 aaPredicted RBP22.78■■□□□ 1.24
SSBP4-212ENST00000601919 PDE1AP54750 535 aa22.78■■□□□ 1.24
SSBP4-212ENST00000601919 PUM3Q15397 648 aaKnown RBP22.78■■□□□ 1.24
SSBP4-212ENST00000601919 STAP2Q9UGK3 403 aa22.78■■□□□ 1.24
SSBP4-212ENST00000601919 TTC41PQ6P2S7 1318 aa22.78■■□□□ 1.24
SSBP4-212ENST00000601919 CHRNDQ07001 517 aa22.77■■□□□ 1.24
SSBP4-212ENST00000601919 ATP2B3Q16720 1220 aa22.77■■□□□ 1.24
SSBP4-212ENST00000601919 VGLL2Q8N8G2 317 aa22.77■■□□□ 1.24
SSBP4-212ENST00000601919 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
SSBP4-212ENST00000601919 SALL3Q9BXA9 1300 aa22.77■■□□□ 1.24
SSBP4-212ENST00000601919 A0A1B0GUL6 1792 aa22.76■■□□□ 1.23
SSBP4-212ENST00000601919 ERC2O15083 957 aa22.76■■□□□ 1.23
SSBP4-212ENST00000601919 OTUD7AQ8TE49 926 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-212ENST00000601919 CNKSR1Q969H4 720 aa22.76■■□□□ 1.23
SSBP4-212ENST00000601919 NEUROD6Q96NK8 337 aa22.76■■□□□ 1.23
SSBP4-212ENST00000601919 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-212ENST00000601919 TMX4Q9H1E5 349 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-212ENST00000601919 COL4A1P02462 1669 aa22.75■■□□□ 1.23
SSBP4-212ENST00000601919 A0A1B0GUL7 405 aa22.75■■□□□ 1.23
SSBP4-212ENST00000601919 SLC5A1P13866 664 aa22.75■■□□□ 1.23
SSBP4-212ENST00000601919 LPIN2Q92539 896 aa22.75■■□□□ 1.23
SSBP4-212ENST00000601919 ZNF622Q969S3 477 aaKnown RBP eCLIP22.75■■□□□ 1.23
SSBP4-212ENST00000601919 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
SSBP4-212ENST00000601919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.75■■□□□ 1.23
SSBP4-212ENST00000601919 DLEC1Q9Y238 1755 aa22.74■■□□□ 1.23
SSBP4-212ENST00000601919 PPEF1O14829 653 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-212ENST00000601919 IFIT1P09914 478 aaKnown RBP22.74■■□□□ 1.23
SSBP4-212ENST00000601919 GORABQ5T7V8 394 aa22.74■■□□□ 1.23
SSBP4-212ENST00000601919 SPON1Q9HCB6 807 aa22.74■■□□□ 1.23
SSBP4-212ENST00000601919 TGFB2P61812 414 aa22.73■■□□□ 1.23
SSBP4-212ENST00000601919 TIMM10P62072 90 aa22.73■■□□□ 1.23
SSBP4-212ENST00000601919 UBE4AQ14139 1066 aa22.73■■□□□ 1.23
SSBP4-212ENST00000601919 HELBQ8NG08 1087 aaPredicted RBP22.73■■□□□ 1.23
SSBP4-212ENST00000601919 SGIP1Q9BQI5 828 aa22.73■■□□□ 1.23
SSBP4-212ENST00000601919 ARAP2Q8WZ64 1704 aa22.72■■□□□ 1.23
SSBP4-212ENST00000601919 GLRX3O76003 335 aaKnown RBP22.72■■□□□ 1.23
SSBP4-212ENST00000601919 KCNJ4P48050 445 aa22.72■■□□□ 1.23
SSBP4-212ENST00000601919 BMP2KLQ5H9B9 411 aa22.72■■□□□ 1.23
SSBP4-212ENST00000601919 TTC22Q5TAA0 569 aa22.72■■□□□ 1.23
SSBP4-212ENST00000601919 SP8Q8IXZ3 490 aa22.72■■□□□ 1.23
SSBP4-212ENST00000601919 DBNLQ9UJU6 430 aaKnown RBP22.72■■□□□ 1.23
SSBP4-212ENST00000601919 CACNA1SQ13698 1873 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 TAF5LO75529 589 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 FGFR2P21802 821 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 PTGER2P43116 358 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 CCDC158Q5M9N0 1113 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 XAGE2Q96GT9 111 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 DBNDD2Q9BQY9 259 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 ANKIB1Q9P2G1 1089 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 ATP6V0A2Q9Y487 856 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 CD2APQ9Y5K6 639 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 XDHP47989 1333 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 LRRC37AA6NMS7 1700 aa22.71■■□□□ 1.23
SSBP4-212ENST00000601919 CHRNA5P30532 468 aa22.7■■□□□ 1.22
SSBP4-212ENST00000601919 TLR7Q9NYK1 1049 aaKnown RBP22.7■■□□□ 1.22
SSBP4-212ENST00000601919 LEMD3Q9Y2U8 911 aa22.7■■□□□ 1.22
SSBP4-212ENST00000601919 ATP5JP18859 108 aa22.68■■□□□ 1.22
SSBP4-212ENST00000601919 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
SSBP4-212ENST00000601919 ZNF804BA4D1E1 1349 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 ATP2B4P23634 1241 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 TTC39AQ5SRH9 613 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 TSHZ3Q63HK5 1081 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 PRPF40BQ6NWY9 871 aaKnown RBP22.67■■□□□ 1.22
SSBP4-212ENST00000601919 TTLL6Q8N841 843 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
SSBP4-212ENST00000601919 DPEP1P16444 411 aa22.66■■□□□ 1.22
SSBP4-212ENST00000601919 ADORA1P30542 326 aa22.66■■□□□ 1.22
SSBP4-212ENST00000601919 GRIPAP1Q4V328 841 aa22.66■■□□□ 1.22
SSBP4-212ENST00000601919 CC2D2BQ6DHV5 1058 aa22.66■■□□□ 1.22
SSBP4-212ENST00000601919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.66■■□□□ 1.22
SSBP4-212ENST00000601919 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-212ENST00000601919 GGA1Q9UJY5 639 aa22.66■■□□□ 1.22
SSBP4-212ENST00000601919 NSFL1CQ9UNZ2 370 aaKnown RBP22.66■■□□□ 1.22
SSBP4-212ENST00000601919 AK9Q5TCS8 1911 aa22.65■■□□□ 1.22
SSBP4-212ENST00000601919 UQCRFS1P1P0C7P4 283 aa22.65■■□□□ 1.22
SSBP4-212ENST00000601919 GPSM2P81274 684 aa22.65■■□□□ 1.22
SSBP4-212ENST00000601919 CAVIN4Q5BKX8 364 aa22.65■■□□□ 1.22
SSBP4-212ENST00000601919 ZNF512BQ96KM6 892 aaPredicted RBP22.65■■□□□ 1.22
SSBP4-212ENST00000601919 SLX4Q8IY92 1834 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms