RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RAB11FIP3O75154 756 aa28.37■■■□□ 2.13
IRF3-227ENST00000600911 NPR1P16066 1061 aa28.37■■■□□ 2.13
IRF3-227ENST00000600911 KCNA3P22001 575 aa28.37■■■□□ 2.13
IRF3-227ENST00000600911 IGHMBP2P38935 993 aaKnown RBP28.37■■■□□ 2.13
IRF3-227ENST00000600911 VGLL2Q8N8G2 317 aa28.37■■■□□ 2.13
IRF3-227ENST00000600911 HELBQ8NG08 1087 aaPredicted RBP28.37■■■□□ 2.13
IRF3-227ENST00000600911 LRRCC1Q9C099 1032 aa28.37■■■□□ 2.13
IRF3-227ENST00000600911 A0A0G2JLW4 131 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 SNAP23O00161 211 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 DPEP1P16444 411 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 MASTLQ96GX5 879 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 CRAMP1Q96RY5 1269 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 MPHOSPH8Q99549 860 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 IL15P40933 162 aaPredicted RBP28.36■■■□□ 2.13
IRF3-227ENST00000600911 OLFM4Q6UX06 510 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 KIF1BPQ96EK5 621 aa28.36■■■□□ 2.13
IRF3-227ENST00000600911 H0YIN7 160 aa28.35■■■□□ 2.13
IRF3-227ENST00000600911 ZNF622Q969S3 477 aaKnown RBP eCLIP28.35■■■□□ 2.13
IRF3-227ENST00000600911 BSDC1Q9NW68 430 aaPredicted RBP28.35■■■□□ 2.13
IRF3-227ENST00000600911 SRCAPQ6ZRS2 3230 aa28.34■■■□□ 2.13
IRF3-227ENST00000600911 HSP90AB4PQ58FF6 505 aa28.34■■■□□ 2.13
IRF3-227ENST00000600911 KLHL34Q8N239 644 aa28.34■■■□□ 2.13
IRF3-227ENST00000600911 PPP1R1BQ9UD71 204 aaPredicted RBP28.34■■■□□ 2.13
IRF3-227ENST00000600911 FBXO3Q9UK99 471 aa28.34■■■□□ 2.13
IRF3-227ENST00000600911 TAF5LO75529 589 aa28.33■■■□□ 2.13
IRF3-227ENST00000600911 CHRNDQ07001 517 aa28.33■■■□□ 2.13
IRF3-227ENST00000600911 EAF2Q96CJ1 260 aaPredicted RBP28.33■■■□□ 2.13
IRF3-227ENST00000600911 MINPP1Q9UNW1 487 aa28.33■■■□□ 2.13
IRF3-227ENST00000600911 LTBP1Q14766 1721 aa28.33■■■□□ 2.13
IRF3-227ENST00000600911 TLR7Q9NYK1 1049 aaKnown RBP28.32■■■□□ 2.12
IRF3-227ENST00000600911 ZNF609O15014 1411 aa28.32■■■□□ 2.12
IRF3-227ENST00000600911 METTL24Q5JXM2 366 aa28.32■■■□□ 2.12
IRF3-227ENST00000600911 STYK1Q6J9G0 422 aa28.32■■■□□ 2.12
IRF3-227ENST00000600911 ERC1Q8IUD2 1116 aa28.32■■■□□ 2.12
IRF3-227ENST00000600911 WWC3Q9ULE0 1092 aa28.32■■■□□ 2.12
IRF3-227ENST00000600911 NLGN2Q8NFZ4 835 aa28.31■■■□□ 2.12
IRF3-227ENST00000600911 SALL3Q9BXA9 1300 aa28.31■■■□□ 2.12
IRF3-227ENST00000600911 ARAP2Q8WZ64 1704 aa28.3■■■□□ 2.12
IRF3-227ENST00000600911 PPEF1O14829 653 aaPredicted RBP28.29■■■□□ 2.12
IRF3-227ENST00000600911 TNNI3KQ59H18 835 aa28.29■■■□□ 2.12
IRF3-227ENST00000600911 CCDC8Q9H0W5 538 aaPredicted RBP28.29■■■□□ 2.12
IRF3-227ENST00000600911 FPGT-TNNI3KV9GXZ4 949 aa28.29■■■□□ 2.12
IRF3-227ENST00000600911 PRPF40BQ6NWY9 871 aaKnown RBP28.29■■■□□ 2.12
IRF3-227ENST00000600911 CEP126Q9P2H0 1117 aa28.29■■■□□ 2.12
IRF3-227ENST00000600911 MROH5Q6ZUA9 1318 aa28.28■■■□□ 2.12
IRF3-227ENST00000600911 RGS3P49796 1198 aa28.28■■■□□ 2.12
IRF3-227ENST00000600911 TIMM10P62072 90 aa28.28■■■□□ 2.12
IRF3-227ENST00000600911 TSHZ3Q63HK5 1081 aa28.28■■■□□ 2.12
IRF3-227ENST00000600911 DUOX1Q9NRD9 1551 aa28.27■■■□□ 2.12
IRF3-227ENST00000600911 PDE8BO95263 885 aa28.27■■■□□ 2.12
IRF3-227ENST00000600911 AACSQ86V21 672 aa28.27■■■□□ 2.12
IRF3-227ENST00000600911 CD2APQ9Y5K6 639 aa28.27■■■□□ 2.12
IRF3-227ENST00000600911 BBOX1O75936 387 aa28.26■■■□□ 2.11
IRF3-227ENST00000600911 FGFR2P21802 821 aa28.26■■■□□ 2.11
IRF3-227ENST00000600911 ALDH1B1P30837 517 aa28.26■■■□□ 2.11
IRF3-227ENST00000600911 TGFB2P61812 414 aa28.26■■■□□ 2.11
IRF3-227ENST00000600911 ZNF219Q9P2Y4 722 aaPredicted RBP28.26■■■□□ 2.11
IRF3-227ENST00000600911 ADORA1P30542 326 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 GPSM2P81274 684 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 DBNLQ9UJU6 430 aaKnown RBP28.25■■■□□ 2.11
IRF3-227ENST00000600911 A0A1B0GUL7 405 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 PLEKHM2Q8IWE5 1019 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 CLASRPQ8N2M8 674 aaKnown RBP28.25■■■□□ 2.11
IRF3-227ENST00000600911 C7orf43Q8WVR3 580 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 DBNDD2Q9BQY9 259 aa28.25■■■□□ 2.11
IRF3-227ENST00000600911 FHDC1Q9C0D6 1143 aaPredicted RBP28.25■■■□□ 2.11
IRF3-227ENST00000600911 KLRK1P26718 216 aa28.24■■■□□ 2.11
IRF3-227ENST00000600911 ATP6V0A2Q9Y487 856 aa28.24■■■□□ 2.11
IRF3-227ENST00000600911 SNED1Q8TER0 1413 aa28.24■■■□□ 2.11
IRF3-227ENST00000600911 CNKSR1Q969H4 720 aa28.23■■■□□ 2.11
IRF3-227ENST00000600911 GPR101Q96P66 508 aaPredicted RBP28.23■■■□□ 2.11
IRF3-227ENST00000600911 GPR108Q9NPR9 543 aa28.23■■■□□ 2.11
IRF3-227ENST00000600911 ATP2B3Q16720 1220 aa28.22■■■□□ 2.11
IRF3-227ENST00000600911 SP8Q8IXZ3 490 aa28.22■■■□□ 2.11
IRF3-227ENST00000600911 NEUROD6Q96NK8 337 aa28.21■■■□□ 2.11
IRF3-227ENST00000600911 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.1
IRF3-227ENST00000600911 PUM3Q15397 648 aaKnown RBP28.2■■■□□ 2.1
IRF3-227ENST00000600911 TTLL6Q8N841 843 aa28.2■■■□□ 2.1
IRF3-227ENST00000600911 ZBTB47Q9UFB7 747 aaPredicted RBP28.2■■■□□ 2.1
IRF3-227ENST00000600911 XAGE2Q96GT9 111 aa28.19■■■□□ 2.1
IRF3-227ENST00000600911 C21orf2O43822 256 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 IFIT2P09913 472 aaKnown RBP28.18■■■□□ 2.1
IRF3-227ENST00000600911 TXNRD3Q86VQ6 643 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 POLLQ9UGP5 575 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 NSFL1CQ9UNZ2 370 aaKnown RBP28.18■■■□□ 2.1
IRF3-227ENST00000600911 XDHP47989 1333 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 MX1P20591 662 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 PDE1AP54750 535 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 PIM2Q9P1W9 311 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 ANKIB1Q9P2G1 1089 aa28.18■■■□□ 2.1
IRF3-227ENST00000600911 TMC4Q7Z404 712 aa28.17■■■□□ 2.1
IRF3-227ENST00000600911 LPIN2Q92539 896 aa28.17■■■□□ 2.1
IRF3-227ENST00000600911 ANKRD2Q9GZV1 360 aa28.17■■■□□ 2.1
IRF3-227ENST00000600911 AKAP2Q9Y2D5 859 aa28.17■■■□□ 2.1
IRF3-227ENST00000600911 PODXL2Q9NZ53 605 aa28.16■■■□□ 2.1
IRF3-227ENST00000600911 ARFGEF1Q9Y6D6 1849 aa28.16■■■□□ 2.1
IRF3-227ENST00000600911 AKAP11Q9UKA4 1901 aa28.16■■■□□ 2.1
IRF3-227ENST00000600911 ZNF804BA4D1E1 1349 aa28.15■■■□□ 2.1
IRF3-227ENST00000600911 PI4K2BQ8TCG2 481 aa28.15■■■□□ 2.1
IRF3-227ENST00000600911 SYT17Q9BSW7 474 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms