RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 FPGT-TNNI3KV9GXZ4 949 aa18.02■□□□□ 0.48
VRK3-212ENST00000596814 IFIT2P09913 472 aaKnown RBP18.01■□□□□ 0.47
VRK3-212ENST00000596814 MX1P20591 662 aa18.01■□□□□ 0.47
VRK3-212ENST00000596814 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
VRK3-212ENST00000596814 EAF2Q96CJ1 260 aaPredicted RBP18.01■□□□□ 0.47
VRK3-212ENST00000596814 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
VRK3-212ENST00000596814 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
VRK3-212ENST00000596814 POLD1P28340 1107 aa18■□□□□ 0.47
VRK3-212ENST00000596814 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
VRK3-212ENST00000596814 PDE1AP54750 535 aa18■□□□□ 0.47
VRK3-212ENST00000596814 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
VRK3-212ENST00000596814 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
VRK3-212ENST00000596814 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
VRK3-212ENST00000596814 ATF5Q9Y2D1 282 aaPredicted RBP17.99■□□□□ 0.47
VRK3-212ENST00000596814 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
VRK3-212ENST00000596814 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 SRGNP10124 158 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 NPR1P16066 1061 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 CRAMP1Q96RY5 1269 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 OSBPL3Q9H4L5 887 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 STAP2Q9UGK3 403 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 AOX1Q06278 1338 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 CACNA1SQ13698 1873 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 PDE8BO95263 885 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 CHRNDQ07001 517 aa17.98■□□□□ 0.47
VRK3-212ENST00000596814 TLR7Q9NYK1 1049 aaKnown RBP17.98■□□□□ 0.47
VRK3-212ENST00000596814 DLEC1Q9Y238 1755 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 LRRC37AA6NMS7 1700 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 ATP2B3Q16720 1220 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 TSHZ3Q63HK5 1081 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 C2CD5Q86YS7 1000 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 MASTLQ96GX5 879 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
VRK3-212ENST00000596814 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
VRK3-212ENST00000596814 PUM3Q15397 648 aaKnown RBP17.96■□□□□ 0.47
VRK3-212ENST00000596814 HELBQ8NG08 1087 aaPredicted RBP17.96■□□□□ 0.47
VRK3-212ENST00000596814 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
VRK3-212ENST00000596814 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
VRK3-212ENST00000596814 H0YIN7 160 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 DBNDD2Q9BQY9 259 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 ECHDC1Q9NTX5 307 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 TAF5LO75529 589 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 BBOX1O75936 387 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 TIMM10P62072 90 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
VRK3-212ENST00000596814 ERC2O15083 957 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 GSPT1P15170 499 aaKnown RBP17.94■□□□□ 0.46
VRK3-212ENST00000596814 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 STYK1Q6J9G0 422 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 PI4K2BQ8TCG2 481 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 LPIN2Q92539 896 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
VRK3-212ENST00000596814 ANKRD2Q9GZV1 360 aa17.94■□□□□ 0.46
VRK3-212ENST00000596814 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
VRK3-212ENST00000596814 SLC5A1P13866 664 aa17.93■□□□□ 0.46
VRK3-212ENST00000596814 FGFR2P21802 821 aa17.93■□□□□ 0.46
VRK3-212ENST00000596814 CHRNA5P30532 468 aa17.93■□□□□ 0.46
VRK3-212ENST00000596814 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
VRK3-212ENST00000596814 GLRX3O76003 335 aaKnown RBP17.92■□□□□ 0.46
VRK3-212ENST00000596814 XAGE2Q96GT9 111 aa17.92■□□□□ 0.46
VRK3-212ENST00000596814 KIAA1551Q9HCM1 1747 aa17.92■□□□□ 0.46
VRK3-212ENST00000596814 ADORA1P30542 326 aa17.92■□□□□ 0.46
VRK3-212ENST00000596814 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
VRK3-212ENST00000596814 IFIT1P09914 478 aaKnown RBP17.91■□□□□ 0.46
VRK3-212ENST00000596814 PTGER2P43116 358 aa17.91■□□□□ 0.46
VRK3-212ENST00000596814 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
VRK3-212ENST00000596814 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
VRK3-212ENST00000596814 XDHP47989 1333 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 SNAP23O00161 211 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 KCNJ4P48050 445 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 SLX4Q8IY92 1834 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 LTBP1Q14766 1721 aa17.9■□□□□ 0.46
VRK3-212ENST00000596814 ATP5JP18859 108 aa17.89■□□□□ 0.46
VRK3-212ENST00000596814 CCDC158Q5M9N0 1113 aa17.89■□□□□ 0.46
VRK3-212ENST00000596814 SP8Q8IXZ3 490 aa17.89■□□□□ 0.46
VRK3-212ENST00000596814 ANKIB1Q9P2G1 1089 aa17.89■□□□□ 0.46
VRK3-212ENST00000596814 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.46
VRK3-212ENST00000596814 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
VRK3-212ENST00000596814 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
VRK3-212ENST00000596814 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
VRK3-212ENST00000596814 SDSP20132 328 aa17.88■□□□□ 0.45
VRK3-212ENST00000596814 GPSM2P81274 684 aa17.88■□□□□ 0.45
VRK3-212ENST00000596814 BOLA2Q9H3K6 86 aa17.88■□□□□ 0.45
VRK3-212ENST00000596814 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
VRK3-212ENST00000596814 TRIM6-TRIM34B2RNG4 842 aa17.87■□□□□ 0.45
VRK3-212ENST00000596814 DPEP1P16444 411 aa17.87■□□□□ 0.45
VRK3-212ENST00000596814 TGFB2P61812 414 aa17.87■□□□□ 0.45
VRK3-212ENST00000596814 TMX4Q9H1E5 349 aaPredicted RBP17.87■□□□□ 0.45
VRK3-212ENST00000596814 LEMD3Q9Y2U8 911 aa17.87■□□□□ 0.45
VRK3-212ENST00000596814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.86■□□□□ 0.45
VRK3-212ENST00000596814 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
VRK3-212ENST00000596814 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
VRK3-212ENST00000596814 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
VRK3-212ENST00000596814 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms