RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CC2D2BQ6DHV5 1058 aa28.05■■■□□ 2.08
SNRNP70-204ENST00000595231 GPR162Q16538 588 aa28.04■■■□□ 2.08
SNRNP70-204ENST00000595231 ATG9AQ7Z3C6 839 aa28.04■■■□□ 2.08
SNRNP70-204ENST00000595231 SIL1Q9H173 461 aa28.04■■■□□ 2.08
SNRNP70-204ENST00000595231 CNNM1Q9NRU3 951 aa28.04■■■□□ 2.08
SNRNP70-204ENST00000595231 EYA2O00167 538 aa28.03■■■□□ 2.08
SNRNP70-204ENST00000595231 SOGA3Q5TF21 947 aa28.03■■■□□ 2.08
SNRNP70-204ENST00000595231 FBXO3Q9UK99 471 aa28.03■■■□□ 2.08
SNRNP70-204ENST00000595231 CCDC93Q567U6 631 aa28.03■■■□□ 2.08
SNRNP70-204ENST00000595231 CIAO1O76071 339 aa28.02■■■□□ 2.08
SNRNP70-204ENST00000595231 GPSM2P81274 684 aa28.02■■■□□ 2.08
SNRNP70-204ENST00000595231 CHRNDQ07001 517 aa28.02■■■□□ 2.08
SNRNP70-204ENST00000595231 NOP58Q9Y2X3 529 aaKnown RBP28.02■■■□□ 2.08
SNRNP70-204ENST00000595231 FER1L6Q2WGJ9 1857 aa28.01■■■□□ 2.07
SNRNP70-204ENST00000595231 HMMRO75330 724 aa28.01■■■□□ 2.07
SNRNP70-204ENST00000595231 TMX4Q9H1E5 349 aaPredicted RBP28.01■■■□□ 2.07
SNRNP70-204ENST00000595231 RTKN2Q8IZC4 609 aa28■■■□□ 2.07
SNRNP70-204ENST00000595231 PODXL2Q9NZ53 605 aa28■■■□□ 2.07
SNRNP70-204ENST00000595231 NSFL1CQ9UNZ2 370 aaKnown RBP28■■■□□ 2.07
SNRNP70-204ENST00000595231 LTBP1Q14766 1721 aa28■■■□□ 2.07
SNRNP70-204ENST00000595231 GRIPAP1Q4V328 841 aa28■■■□□ 2.07
SNRNP70-204ENST00000595231 MPNDQ8N594 471 aa28■■■□□ 2.07
SNRNP70-204ENST00000595231 SURF6O75683 361 aaKnown RBP27.99■■■□□ 2.07
SNRNP70-204ENST00000595231 HELBQ8NG08 1087 aaPredicted RBP27.99■■■□□ 2.07
SNRNP70-204ENST00000595231 A0A1B0GUL6 1792 aa27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 WTIPA6NIX2 430 aaPredicted RBP27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 NFKBIEO00221 500 aa27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 NEFLP07196 543 aa27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 IL15P40933 162 aaPredicted RBP27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 ANKIB1Q9P2G1 1089 aa27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 MROH5Q6ZUA9 1318 aa27.98■■■□□ 2.07
SNRNP70-204ENST00000595231 TAF5LO75529 589 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 DPP8Q6V1X1 898 aaPredicted RBP27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 VGLL2Q8N8G2 317 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 RTFDC1Q9BY42 306 aaPredicted RBP27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 ANKRD2Q9GZV1 360 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 XDHP47989 1333 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 DUOX1Q9NRD9 1551 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 ARHGAP27Q6ZUM4 889 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 PSMD1Q99460 953 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 POLLQ9UGP5 575 aa27.97■■■□□ 2.07
SNRNP70-204ENST00000595231 GRIN3BO60391 1043 aa27.96■■■□□ 2.07
SNRNP70-204ENST00000595231 G3BP1Q13283 466 aaKnown RBP eCLIP27.96■■■□□ 2.071e-7■□□□□ 8.5
SNRNP70-204ENST00000595231 METTL24Q5JXM2 366 aa27.96■■■□□ 2.07
SNRNP70-204ENST00000595231 EXOC6BQ9Y2D4 811 aa27.96■■■□□ 2.07
SNRNP70-204ENST00000595231 SASH1O94885 1247 aa27.95■■■□□ 2.07
SNRNP70-204ENST00000595231 HDAC1Q13547 482 aaPredicted RBP27.95■■■□□ 2.07
SNRNP70-204ENST00000595231 TBC1D16Q8TBP0 767 aa27.95■■■□□ 2.07
SNRNP70-204ENST00000595231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.95■■■□□ 2.07
SNRNP70-204ENST00000595231 SNAP23O00161 211 aa27.94■■■□□ 2.06
SNRNP70-204ENST00000595231 PDE8BO95263 885 aa27.94■■■□□ 2.06
SNRNP70-204ENST00000595231 FKBP4Q02790 459 aaKnown RBP eCLIP27.94■■■□□ 2.063e-10■□□□□ 9.7
SNRNP70-204ENST00000595231 DCTPP1Q9H773 170 aa27.94■■■□□ 2.06
SNRNP70-204ENST00000595231 LTBP3Q9NS15 1303 aa27.94■■■□□ 2.06
SNRNP70-204ENST00000595231 TAOK3Q9H2K8 898 aa27.94■■■□□ 2.06
SNRNP70-204ENST00000595231 RASSF7Q02833 373 aa27.93■■■□□ 2.06
SNRNP70-204ENST00000595231 GGA1Q9UJY5 639 aa27.93■■■□□ 2.06
SNRNP70-204ENST00000595231 LEMD3Q9Y2U8 911 aa27.93■■■□□ 2.06
SNRNP70-204ENST00000595231 ATP2B4P23634 1241 aa27.92■■■□□ 2.06
SNRNP70-204ENST00000595231 PRELPP51888 382 aa27.92■■■□□ 2.06
SNRNP70-204ENST00000595231 CEP126Q9P2H0 1117 aa27.92■■■□□ 2.06
SNRNP70-204ENST00000595231 UFL1O94874 794 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 IGHDP01880 384 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 TFCP2Q12800 502 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 ZNF804BA4D1E1 1349 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 C6orf229H3BNL8 230 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 HSP90AB4PQ58FF6 505 aa27.91■■■□□ 2.06
SNRNP70-204ENST00000595231 OS9Q13438 667 aaPredicted RBP27.9■■■□□ 2.06
SNRNP70-204ENST00000595231 GPR101Q96P66 508 aaPredicted RBP27.9■■■□□ 2.06
SNRNP70-204ENST00000595231 ZNF277Q9NRM2 450 aaPredicted RBP27.9■■■□□ 2.06
SNRNP70-204ENST00000595231 FGFR2P21802 821 aa27.89■■■□□ 2.06
SNRNP70-204ENST00000595231 SUPT20HQ8NEM7 779 aa27.89■■■□□ 2.06
SNRNP70-204ENST00000595231 SBF1O95248 1867 aa27.88■■■□□ 2.05
SNRNP70-204ENST00000595231 UBE4AQ14139 1066 aa27.88■■■□□ 2.05
SNRNP70-204ENST00000595231 RWDD1Q9H446 243 aaPredicted RBP27.88■■■□□ 2.05
SNRNP70-204ENST00000595231 IRS2Q9Y4H2 1338 aa27.88■■■□□ 2.05
SNRNP70-204ENST00000595231 DCAF8L1A6NGE4 600 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 RAB11FIP3O75154 756 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 KLRK1P26718 216 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 PUM3Q15397 648 aaKnown RBP27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 TXNRD3Q86VQ6 643 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 ERC1Q8IUD2 1116 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 RHPN1Q8TCX5 695 aa27.87■■■□□ 2.05
SNRNP70-204ENST00000595231 CCDC88AQ3V6T2 1871 aa27.86■■■□□ 2.05
SNRNP70-204ENST00000595231 KCNJ4P48050 445 aa27.86■■■□□ 2.05
SNRNP70-204ENST00000595231 WASHC4Q2M389 1173 aa27.86■■■□□ 2.05
SNRNP70-204ENST00000595231 APBB1O00213 710 aa27.85■■■□□ 2.05
SNRNP70-204ENST00000595231 KIAA2012Q0VF49 1180 aa27.85■■■□□ 2.05
SNRNP70-204ENST00000595231 VPS33BQ9H267 617 aa27.85■■■□□ 2.05
SNRNP70-204ENST00000595231 IARSP41252 1262 aaKnown RBP27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 AOC3Q16853 763 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 C15orf52Q6ZUT6 534 aaKnown RBP27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 KIF1BPQ96EK5 621 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 EYA3Q99504 573 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 MED23Q9ULK4 1368 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 RIMBP2O15034 1052 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 LMNB1P20700 586 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 TIMM10P62072 90 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 ATP2B3Q16720 1220 aa27.84■■■□□ 2.05
SNRNP70-204ENST00000595231 ERICH6BQ5W0A0 696 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms