RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 KIAA2012Q0VF49 1180 aa14.93□□□□□ -0.02
H3F3B-212ENST00000592643 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
H3F3B-212ENST00000592643 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 ANKRD18BA2A2Z9 1011 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 GLTPD2A6NH11 291 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 YDJCA8MPS7 323 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 KIF3CO14782 793 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 KLRK1P26718 216 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
H3F3B-212ENST00000592643 KLHDC4Q8TBB5 520 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 PANK1Q8TE04 598 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
H3F3B-212ENST00000592643 CCDC88AQ3V6T2 1871 aa14.92□□□□□ -0.02
H3F3B-212ENST00000592643 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
H3F3B-212ENST00000592643 PPIP5K2O43314 1243 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 DDNO94850 711 aaPredicted RBP14.91□□□□□ -0.02
H3F3B-212ENST00000592643 UBTFL1P0CB47 393 aaPredicted RBP14.91□□□□□ -0.02
H3F3B-212ENST00000592643 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 TXNRD3Q86VQ6 643 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 DZIP1LQ8IYY4 767 aaKnown RBP14.91□□□□□ -0.02
H3F3B-212ENST00000592643 LARGE2Q8N3Y3 721 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 KCNQ5Q9NR82 932 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 XDHP47989 1333 aa14.91□□□□□ -0.02
H3F3B-212ENST00000592643 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
H3F3B-212ENST00000592643 UFL1O94874 794 aa14.9□□□□□ -0.02
H3F3B-212ENST00000592643 IGHMBP2P38935 993 aaKnown RBP14.9□□□□□ -0.02
H3F3B-212ENST00000592643 CHRNDQ07001 517 aa14.9□□□□□ -0.02
H3F3B-212ENST00000592643 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
H3F3B-212ENST00000592643 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
H3F3B-212ENST00000592643 RIPOR2Q9Y4F9 1068 aa14.9□□□□□ -0.02
H3F3B-212ENST00000592643 C6orf229H3BNL8 230 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 RIMBP2O15034 1052 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 TAF5LO75529 589 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 PTPN12Q05209 780 aaKnown RBP14.89□□□□□ -0.03
H3F3B-212ENST00000592643 WASHC4Q2M389 1173 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 CCDC57Q2TAC2 916 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 LRRC24Q50LG9 513 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 SUPT20HQ8NEM7 779 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 GPBP1L1Q9HC44 474 aaPredicted RBP14.89□□□□□ -0.03
H3F3B-212ENST00000592643 ANKIB1Q9P2G1 1089 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 GGA1Q9UJY5 639 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 SPEF2Q9C093 1822 aa14.89□□□□□ -0.03
H3F3B-212ENST00000592643 CXCL9Q07325 125 aa14.88□□□□□ -0.03
H3F3B-212ENST00000592643 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
H3F3B-212ENST00000592643 VGLL2Q8N8G2 317 aa14.88□□□□□ -0.03
H3F3B-212ENST00000592643 MPHOSPH8Q99549 860 aa14.88□□□□□ -0.03
H3F3B-212ENST00000592643 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
H3F3B-212ENST00000592643 RRAGCQ9HB90 399 aa14.88□□□□□ -0.03
H3F3B-212ENST00000592643 ATP2B4P23634 1241 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 MTX1Q13505 466 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 ATG9AQ7Z3C6 839 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
H3F3B-212ENST00000592643 DBNDD1Q9H9R9 158 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
H3F3B-212ENST00000592643 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 PNMA6EA0A0J9YXQ4 647 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 GNAI3P08754 354 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 NIM1KQ8IY84 436 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 JDP2Q8WYK2 163 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
H3F3B-212ENST00000592643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.86□□□□□ -0.03
H3F3B-212ENST00000592643 ZNF804BA4D1E1 1349 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 KDM2BQ8NHM5 1336 aa14.86□□□□□ -0.03
H3F3B-212ENST00000592643 MED23Q9ULK4 1368 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 A0A1B0GUL6 1792 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 ECE2O60344 883 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 SCNN1DP51172 638 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 ITPRIPQ8IWB1 547 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
H3F3B-212ENST00000592643 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 LEMD3Q9Y2U8 911 aa14.85□□□□□ -0.03
H3F3B-212ENST00000592643 RAD17O75943 681 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 GNAI2P04899 355 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 POTEIP0CG38 1075 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 C15orf52Q6ZUT6 534 aaKnown RBP14.84□□□□□ -0.03
H3F3B-212ENST00000592643 GPC2Q8N158 579 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 SCN9AQ15858 1988 aa14.84□□□□□ -0.03
H3F3B-212ENST00000592643 SHTN1A0MZ66 631 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 EYA2O00167 538 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 MVPQ14764 893 aaKnown RBP14.83□□□□□ -0.04
H3F3B-212ENST00000592643 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 EYA3Q99504 573 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 ZC3H12CQ9C0D7 883 aaKnown RBP14.83□□□□□ -0.04
H3F3B-212ENST00000592643 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
H3F3B-212ENST00000592643 PSMD14O00487 310 aa14.82□□□□□ -0.04
H3F3B-212ENST00000592643 FGFR2P21802 821 aa14.82□□□□□ -0.04
H3F3B-212ENST00000592643 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
H3F3B-212ENST00000592643 POLA2Q14181 598 aa14.82□□□□□ -0.04
H3F3B-212ENST00000592643 ZBTB40Q9NUA8 1239 aa14.82□□□□□ -0.04
H3F3B-212ENST00000592643 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
H3F3B-212ENST00000592643 GJA3Q9Y6H8 435 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms