RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 ANKRD2Q9GZV1 360 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 SIL1Q9H173 461 aa20.97■□□□□ 0.95
SCAMP4-211ENST00000588907 LRRC37AA6NMS7 1700 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 A0A0G2JLW4 131 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 IGHDP01880 384 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 SP8Q8IXZ3 490 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 EXOC6BQ9Y2D4 811 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 ATP6V0A2Q9Y487 856 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 RIPOR2Q9Y4F9 1068 aa20.96■□□□□ 0.95
SCAMP4-211ENST00000588907 TAF1P21675 1872 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 KCNA3P22001 575 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 DALRD3Q5D0E6 543 aaKnown RBP20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 METTL24Q5JXM2 366 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 LRRCC1Q9C099 1032 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 KDM2BQ8NHM5 1336 aa20.95■□□□□ 0.94
SCAMP4-211ENST00000588907 ATG9AQ7Z3C6 839 aa20.94■□□□□ 0.94
SCAMP4-211ENST00000588907 AKAP2Q9Y2D5 859 aa20.94■□□□□ 0.94
SCAMP4-211ENST00000588907 CACNA1SQ13698 1873 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 B4GALNT3Q6L9W6 998 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 GPR108Q9NPR9 543 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 MINPP1Q9UNW1 487 aa20.93■□□□□ 0.94
SCAMP4-211ENST00000588907 CHRNDQ07001 517 aa20.92■□□□□ 0.94
SCAMP4-211ENST00000588907 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
SCAMP4-211ENST00000588907 PUS3Q9BZE2 481 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-211ENST00000588907 XDHP47989 1333 aa20.92■□□□□ 0.94
SCAMP4-211ENST00000588907 SLX4Q8IY92 1834 aa20.92■□□□□ 0.94
SCAMP4-211ENST00000588907 PDE8BO95263 885 aa20.91■□□□□ 0.94
SCAMP4-211ENST00000588907 COL4A1P02462 1669 aa20.91■□□□□ 0.94
SCAMP4-211ENST00000588907 PUM3Q15397 648 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-211ENST00000588907 CLASRPQ8N2M8 674 aaKnown RBP20.91■□□□□ 0.94
SCAMP4-211ENST00000588907 PODXL2Q9NZ53 605 aa20.91■□□□□ 0.94
SCAMP4-211ENST00000588907 A0A1B0GUL6 1792 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 SASH1O94885 1247 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 VGLL2Q8N8G2 317 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 NLGN2Q8NFZ4 835 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 ANKIB1Q9P2G1 1089 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 LEMD3Q9Y2U8 911 aa20.9■□□□□ 0.94
SCAMP4-211ENST00000588907 NUCB1Q02818 461 aa20.89■□□□□ 0.93
SCAMP4-211ENST00000588907 CCDC93Q567U6 631 aa20.89■□□□□ 0.93
SCAMP4-211ENST00000588907 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
SCAMP4-211ENST00000588907 C7orf43Q8WVR3 580 aa20.89■□□□□ 0.93
SCAMP4-211ENST00000588907 ARFGEF1Q9Y6D6 1849 aa20.89■□□□□ 0.93
SCAMP4-211ENST00000588907 ATP2B4P23634 1241 aa20.88■□□□□ 0.93
SCAMP4-211ENST00000588907 KCNJ4P48050 445 aa20.88■□□□□ 0.93
SCAMP4-211ENST00000588907 TFCP2Q12800 502 aa20.88■□□□□ 0.93
SCAMP4-211ENST00000588907 UBE4AQ14139 1066 aa20.88■□□□□ 0.93
SCAMP4-211ENST00000588907 ANKRD45Q5TZF3 282 aa20.88■□□□□ 0.93
SCAMP4-211ENST00000588907 APBB1O00213 710 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 IFIT1P09914 478 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 SLC5A1P13866 664 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 SUPT20HQ8NEM7 779 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 LPIN2Q92539 896 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 GGA1Q9UJY5 639 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 LTBP1Q14766 1721 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 ZNF609O15014 1411 aa20.87■□□□□ 0.93
SCAMP4-211ENST00000588907 ATP2B3Q16720 1220 aa20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 TNNI3KQ59H18 835 aa20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 DPP8Q6V1X1 898 aaPredicted RBP20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 MPNDQ8N594 471 aa20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 NSFL1CQ9UNZ2 370 aaKnown RBP20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 BCS1LQ9Y276 419 aa20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 FPGT-TNNI3KV9GXZ4 949 aa20.86■□□□□ 0.93
SCAMP4-211ENST00000588907 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
SCAMP4-211ENST00000588907 C21orf2O43822 256 aa20.85■□□□□ 0.93
SCAMP4-211ENST00000588907 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-211ENST00000588907 ARAP2Q8WZ64 1704 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 ZNF804BA4D1E1 1349 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 FGFR2P21802 821 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 GPSM2P81274 684 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 GPATCH3Q96I76 525 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 PSMD1Q99460 953 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 EYA3Q99504 573 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
SCAMP4-211ENST00000588907 A0A1B0GUL7 405 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 TAF5LO75529 589 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 UFL1O94874 794 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 C15orf52Q6ZUT6 534 aaKnown RBP20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 AACSQ86V21 672 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 RTFDC1Q9BY42 306 aaPredicted RBP20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 VPS33BQ9H267 617 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
SCAMP4-211ENST00000588907 MED23Q9ULK4 1368 aa20.83■□□□□ 0.92
SCAMP4-211ENST00000588907 TBC1D16Q8TBP0 767 aa20.82■□□□□ 0.92
SCAMP4-211ENST00000588907 CAVIN4Q5BKX8 364 aa20.81■□□□□ 0.92
SCAMP4-211ENST00000588907 EAF2Q96CJ1 260 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-211ENST00000588907 LNPKQ9C0E8 428 aa20.81■□□□□ 0.92
SCAMP4-211ENST00000588907 DUOX1Q9NRD9 1551 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 LTBP3Q9NS15 1303 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 FER1L6Q2WGJ9 1857 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 C6orf229H3BNL8 230 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 SMARCA5O60264 1052 aaPredicted RBP20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 GORABQ5T7V8 394 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 NEUROD6Q96NK8 337 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms