RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
NEDD4L-224ENST00000588712 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.344e-8■■■□□ 15.3
NEDD4L-224ENST00000588712 NEUROD6Q96NK8 337 aa12.91□□□□□ -0.34
NEDD4L-224ENST00000588712 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
NEDD4L-224ENST00000588712 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 TICAM2Q86XR7 235 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 CDC45O75419 566 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 BBOX1O75936 387 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 ATP5JP18859 108 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 GRAPQ13588 217 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 C8orf34Q49A92 452 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 CNTROBQ8N137 903 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 LPIN2Q92539 896 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
NEDD4L-224ENST00000588712 LRP5O75197 1615 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 NRXN2Q9P2S2 1712 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 SLC5A1P13866 664 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 SDSP20132 328 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 TIMM10P62072 90 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
NEDD4L-224ENST00000588712 ZNF609O15014 1411 aa12.88□□□□□ -0.35
NEDD4L-224ENST00000588712 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
NEDD4L-224ENST00000588712 CHRNDQ07001 517 aa12.88□□□□□ -0.35
NEDD4L-224ENST00000588712 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
NEDD4L-224ENST00000588712 NPR1P16066 1061 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 UBE4AQ14139 1066 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 CCDC24Q8N4L8 307 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 ZNF512BQ96KM6 892 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 HIP1O00291 1037 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 XAGE2Q96GT9 111 aa12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-224ENST00000588712 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
NEDD4L-224ENST00000588712 FGFR2P21802 821 aa12.86□□□□□ -0.35
NEDD4L-224ENST00000588712 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
NEDD4L-224ENST00000588712 H0YIN7 160 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 SRGNP10124 158 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 LRRFIP1Q32MZ4 808 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 POLD1P28340 1107 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 HAUS7Q99871 368 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
NEDD4L-224ENST00000588712 KCNJ4P48050 445 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 STYK1Q6J9G0 422 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 LEMD3Q9Y2U8 911 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 RUFY2Q8WXA3 655 aa12.84□□□□□ -0.35
NEDD4L-224ENST00000588712 XDHP47989 1333 aa12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 TAF5LO75529 589 aa12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
NEDD4L-224ENST00000588712 ZBTB22O15209 634 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 REC8O95072 547 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 ATP2B4P23634 1241 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 C2CD5Q86YS7 1000 aa12.82□□□□□ -0.36
NEDD4L-224ENST00000588712 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 PPEF1O14829 653 aaPredicted RBP12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 SEMA3EO15041 775 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 CHMLP26374 656 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 ADORA1P30542 326 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
NEDD4L-224ENST00000588712 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms