RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 HOXA10P31260 410 aaPredicted RBP27.91■■■□□ 2.06
ACTN4-210ENST00000588618 C16orf71Q8IYS4 520 aaPredicted RBP27.91■■■□□ 2.06
ACTN4-210ENST00000588618 PPP1R1BQ9UD71 204 aaPredicted RBP27.91■■■□□ 2.06
ACTN4-210ENST00000588618 PTGER2P43116 358 aa27.9■■■□□ 2.06
ACTN4-210ENST00000588618 KLHL34Q8N239 644 aa27.9■■■□□ 2.06
ACTN4-210ENST00000588618 ZNF622Q969S3 477 aaKnown RBP eCLIP27.9■■■□□ 2.069e-9■□□□□ 11
ACTN4-210ENST00000588618 ALDH1B1P30837 517 aa27.89■■■□□ 2.06
ACTN4-210ENST00000588618 OTUD7AQ8TE49 926 aaPredicted RBP27.89■■■□□ 2.06
ACTN4-210ENST00000588618 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
ACTN4-210ENST00000588618 BSDC1Q9NW68 430 aaPredicted RBP27.89■■■□□ 2.06
ACTN4-210ENST00000588618 CACNA1SQ13698 1873 aa27.89■■■□□ 2.06
ACTN4-210ENST00000588618 TFCP2Q12800 502 aa27.89■■■□□ 2.05
ACTN4-210ENST00000588618 METTL24Q5JXM2 366 aa27.89■■■□□ 2.05
ACTN4-210ENST00000588618 SLC51AQ86UW1 340 aa27.89■■■□□ 2.05
ACTN4-210ENST00000588618 MROH5Q6ZUA9 1318 aa27.88■■■□□ 2.05
ACTN4-210ENST00000588618 CEP126Q9P2H0 1117 aa27.88■■■□□ 2.05
ACTN4-210ENST00000588618 KIAA1551Q9HCM1 1747 aa27.88■■■□□ 2.05
ACTN4-210ENST00000588618 CLASRPQ8N2M8 674 aaKnown RBP27.87■■■□□ 2.05
ACTN4-210ENST00000588618 DLEC1Q9Y238 1755 aa27.87■■■□□ 2.05
ACTN4-210ENST00000588618 BBOX1O75936 387 aa27.87■■■□□ 2.05
ACTN4-210ENST00000588618 STYK1Q6J9G0 422 aa27.87■■■□□ 2.05
ACTN4-210ENST00000588618 CHRNA5P30532 468 aa27.86■■■□□ 2.05
ACTN4-210ENST00000588618 RGS3P49796 1198 aa27.86■■■□□ 2.05
ACTN4-210ENST00000588618 VGLL2Q8N8G2 317 aa27.86■■■□□ 2.05
ACTN4-210ENST00000588618 SALL3Q9BXA9 1300 aa27.85■■■□□ 2.05
ACTN4-210ENST00000588618 TGFB2P61812 414 aa27.84■■■□□ 2.05
ACTN4-210ENST00000588618 TMC4Q7Z404 712 aa27.84■■■□□ 2.05
ACTN4-210ENST00000588618 CNKSR1Q969H4 720 aa27.84■■■□□ 2.05
ACTN4-210ENST00000588618 EAF2Q96CJ1 260 aaPredicted RBP27.84■■■□□ 2.05
ACTN4-210ENST00000588618 TMX4Q9H1E5 349 aaPredicted RBP27.84■■■□□ 2.05
ACTN4-210ENST00000588618 CD2APQ9Y5K6 639 aa27.84■■■□□ 2.05
ACTN4-210ENST00000588618 AKAP2Q9Y2D5 859 aa27.83■■■□□ 2.05
ACTN4-210ENST00000588618 PPEF1O14829 653 aaPredicted RBP27.82■■■□□ 2.04
ACTN4-210ENST00000588618 CHRNDQ07001 517 aa27.82■■■□□ 2.04
ACTN4-210ENST00000588618 LRRC37AA6NMS7 1700 aa27.82■■■□□ 2.04
ACTN4-210ENST00000588618 ZNF609O15014 1411 aa27.82■■■□□ 2.04
ACTN4-210ENST00000588618 TNNI3KQ59H18 835 aa27.81■■■□□ 2.04
ACTN4-210ENST00000588618 HELBQ8NG08 1087 aaPredicted RBP27.81■■■□□ 2.04
ACTN4-210ENST00000588618 FPGT-TNNI3KV9GXZ4 949 aa27.81■■■□□ 2.04
ACTN4-210ENST00000588618 IFIT2P09913 472 aaKnown RBP27.81■■■□□ 2.04
ACTN4-210ENST00000588618 AACSQ86V21 672 aa27.81■■■□□ 2.04
ACTN4-210ENST00000588618 ANKRD2Q9GZV1 360 aa27.81■■■□□ 2.04
ACTN4-210ENST00000588618 TLR7Q9NYK1 1049 aaKnown RBP27.81■■■□□ 2.04
ACTN4-210ENST00000588618 MINPP1Q9UNW1 487 aa27.81■■■□□ 2.04
ACTN4-210ENST00000588618 SLX4Q8IY92 1834 aa27.8■■■□□ 2.04
ACTN4-210ENST00000588618 A0A0G2JLW4 131 aa27.8■■■□□ 2.04
ACTN4-210ENST00000588618 PDE8BO95263 885 aa27.8■■■□□ 2.04
ACTN4-210ENST00000588618 DPEP1P16444 411 aa27.8■■■□□ 2.04
ACTN4-210ENST00000588618 PLEKHM2Q8IWE5 1019 aa27.8■■■□□ 2.04
ACTN4-210ENST00000588618 SNAP23O00161 211 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 TAF5LO75529 589 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 CCDC8Q9H0W5 538 aaPredicted RBP27.78■■■□□ 2.04
ACTN4-210ENST00000588618 GPR108Q9NPR9 543 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 ANKIB1Q9P2G1 1089 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 ARAP2Q8WZ64 1704 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 TSHZ3Q63HK5 1081 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 PRPF40BQ6NWY9 871 aaKnown RBP27.78■■■□□ 2.04
ACTN4-210ENST00000588618 TTLL6Q8N841 843 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 NEUROD6Q96NK8 337 aa27.78■■■□□ 2.04
ACTN4-210ENST00000588618 WTIPA6NIX2 430 aaPredicted RBP27.77■■■□□ 2.04
ACTN4-210ENST00000588618 KCNJ4P48050 445 aa27.77■■■□□ 2.04
ACTN4-210ENST00000588618 TIMM10P62072 90 aa27.77■■■□□ 2.04
ACTN4-210ENST00000588618 PUM3Q15397 648 aaKnown RBP27.77■■■□□ 2.04
ACTN4-210ENST00000588618 DBNLQ9UJU6 430 aaKnown RBP27.77■■■□□ 2.04
ACTN4-210ENST00000588618 BRCA1P38398 1863 aaKnown RBP27.76■■■□□ 2.04
ACTN4-210ENST00000588618 ATP2B3Q16720 1220 aa27.76■■■□□ 2.03
ACTN4-210ENST00000588618 SP8Q8IXZ3 490 aa27.76■■■□□ 2.03
ACTN4-210ENST00000588618 ATP6V0A2Q9Y487 856 aa27.76■■■□□ 2.03
ACTN4-210ENST00000588618 LTBP1Q14766 1721 aa27.76■■■□□ 2.03
ACTN4-210ENST00000588618 A0A1B0GUL7 405 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 KCNA3P22001 575 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 GPATCH3Q96I76 525 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 PIM2Q9P1W9 311 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 FGFR2P21802 821 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 DBNDD2Q9BQY9 259 aa27.75■■■□□ 2.03
ACTN4-210ENST00000588618 MX1P20591 662 aa27.74■■■□□ 2.03
ACTN4-210ENST00000588618 PDE1AP54750 535 aa27.74■■■□□ 2.03
ACTN4-210ENST00000588618 LPIN2Q92539 896 aa27.74■■■□□ 2.03
ACTN4-210ENST00000588618 NSFL1CQ9UNZ2 370 aaKnown RBP27.74■■■□□ 2.03
ACTN4-210ENST00000588618 XDHP47989 1333 aa27.74■■■□□ 2.03
ACTN4-210ENST00000588618 SLC5A1P13866 664 aa27.73■■■□□ 2.03
ACTN4-210ENST00000588618 IFIT1P09914 478 aaKnown RBP27.72■■■□□ 2.03
ACTN4-210ENST00000588618 ADORA1P30542 326 aa27.72■■■□□ 2.03
ACTN4-210ENST00000588618 GORABQ5T7V8 394 aa27.72■■■□□ 2.03
ACTN4-210ENST00000588618 OLFM4Q6UX06 510 aa27.72■■■□□ 2.03
ACTN4-210ENST00000588618 STAP2Q9UGK3 403 aa27.72■■■□□ 2.03
ACTN4-210ENST00000588618 OSBPL3Q9H4L5 887 aa27.72■■■□□ 2.03
ACTN4-210ENST00000588618 UBE4AQ14139 1066 aa27.71■■■□□ 2.03
ACTN4-210ENST00000588618 ZNF219Q9P2Y4 722 aaPredicted RBP27.71■■■□□ 2.03
ACTN4-210ENST00000588618 FHDC1Q9C0D6 1143 aaPredicted RBP27.7■■■□□ 2.03
ACTN4-210ENST00000588618 LEMD3Q9Y2U8 911 aa27.7■■■□□ 2.03
ACTN4-210ENST00000588618 GPSM2P81274 684 aa27.7■■■□□ 2.02
ACTN4-210ENST00000588618 DALRD3Q5D0E6 543 aaKnown RBP27.7■■■□□ 2.02
ACTN4-210ENST00000588618 PI4K2BQ8TCG2 481 aa27.7■■■□□ 2.02
ACTN4-210ENST00000588618 GGA1Q9UJY5 639 aa27.7■■■□□ 2.02
ACTN4-210ENST00000588618 ZNF804BA4D1E1 1349 aa27.69■■■□□ 2.02
ACTN4-210ENST00000588618 CC2D2BQ6DHV5 1058 aa27.69■■■□□ 2.02
ACTN4-210ENST00000588618 XAGE2Q96GT9 111 aa27.69■■■□□ 2.02
ACTN4-210ENST00000588618 DUOX1Q9NRD9 1551 aa27.69■■■□□ 2.02
ACTN4-210ENST00000588618 DPP8Q6V1X1 898 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms