RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 HOXA10P31260 410 aaPredicted RBP9.72□□□□□ -0.85
TPM4-210ENST00000588507 NF2P35240 595 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 CLEC4GQ6UXB4 293 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 SLC51AQ86UW1 340 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 NUTM1Q86Y26 1132 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 C7orf61Q8IZ16 206 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 U2AF1L4Q8WU68 220 aaKnown RBP9.72□□□□□ -0.85
TPM4-210ENST00000588507 RNF208Q9H0X6 261 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 EYSQ5T1H1 3165 aa9.72□□□□□ -0.85
TPM4-210ENST00000588507 FAM177BA6PVY3 158 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 SYN1P17600 705 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 CAPN2P17655 700 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 PRMT2P55345 433 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 SCARF1Q14162 830 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 TMEM31Q5JXX7 168 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 ARMC9Q7Z3E5 817 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
TPM4-210ENST00000588507 ATXN2LQ8WWM7 1075 aaKnown RBP9.71□□□□□ -0.86
TPM4-210ENST00000588507 RBM17Q96I25 401 aaKnown RBP9.71□□□□□ -0.86
TPM4-210ENST00000588507 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
TPM4-210ENST00000588507 RGL2O15211 777 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 SGPL1O95470 568 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 COL26A1Q96A83 441 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 ASB2Q96Q27 587 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 SLC52A2Q9HAB3 445 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 ZNF652Q9Y2D9 606 aa9.7□□□□□ -0.86
TPM4-210ENST00000588507 GNRH1P01148 92 aa9.69□□□□□ -0.86
TPM4-210ENST00000588507 ZBTB48P10074 688 aaPredicted RBP9.69□□□□□ -0.86
TPM4-210ENST00000588507 KIF22Q14807 665 aa9.69□□□□□ -0.86
TPM4-210ENST00000588507 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
TPM4-210ENST00000588507 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
TPM4-210ENST00000588507 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
TPM4-210ENST00000588507 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
TPM4-210ENST00000588507 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
TPM4-210ENST00000588507 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
TPM4-210ENST00000588507 ZNF496Q96IT1 587 aaPredicted RBP9.68□□□□□ -0.86
TPM4-210ENST00000588507 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
TPM4-210ENST00000588507 TEX13AQ9BXU3 409 aaPredicted RBP9.68□□□□□ -0.86
TPM4-210ENST00000588507 COL2A1P02458 1487 aaPredicted RBP9.67□□□□□ -0.86
TPM4-210ENST00000588507 FAM205AQ6ZU69 1335 aa9.67□□□□□ -0.86
TPM4-210ENST00000588507 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
TPM4-210ENST00000588507 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
TPM4-210ENST00000588507 GRK4P32298 578 aa9.67□□□□□ -0.86
TPM4-210ENST00000588507 UBXN2AP68543 259 aa9.67□□□□□ -0.86
TPM4-210ENST00000588507 USP38Q8NB14 1042 aa9.67□□□□□ -0.86
TPM4-210ENST00000588507 PAWRQ96IZ0 340 aaKnown RBP9.67□□□□□ -0.86
TPM4-210ENST00000588507 BIN2Q9UBW5 565 aaPredicted RBP9.67□□□□□ -0.86
TPM4-210ENST00000588507 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 PRKG1Q13976 671 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 NECAB2Q7Z6G3 386 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 WNK4Q96J92 1243 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 TRIM47Q96LD4 638 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 EPHX3Q9H6B9 360 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 SCAF8Q9UPN6 1271 aaKnown RBP9.66□□□□□ -0.86
TPM4-210ENST00000588507 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
TPM4-210ENST00000588507 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.86
TPM4-210ENST00000588507 A1BGP04217 495 aa9.65□□□□□ -0.86
TPM4-210ENST00000588507 TNNT2P45379 298 aaPredicted RBP9.65□□□□□ -0.86
TPM4-210ENST00000588507 MRPS5P82675 430 aaKnown RBP9.65□□□□□ -0.86
TPM4-210ENST00000588507 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
TPM4-210ENST00000588507 PTPN18Q99952 460 aa9.65□□□□□ -0.86
TPM4-210ENST00000588507 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
TPM4-210ENST00000588507 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.86
TPM4-210ENST00000588507 ANGEL1Q9UNK9 670 aaKnown RBP9.65□□□□□ -0.86
TPM4-210ENST00000588507 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
TPM4-210ENST00000588507 GPR37L1O60883 481 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 LACTBP83111 547 aaPredicted RBP9.64□□□□□ -0.87
TPM4-210ENST00000588507 RAET1EQ8TD07 263 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 NYXQ9GZU5 481 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 TTYH1Q9H313 450 aaPredicted RBP9.64□□□□□ -0.87
TPM4-210ENST00000588507 THEGQ9P2T0 379 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 RIPOR2Q9Y4F9 1068 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 TAF1P21675 1872 aa9.64□□□□□ -0.87
TPM4-210ENST00000588507 ABCC12Q96J65 1359 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 BAHCC1Q9P281 2608 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 ZNF280AP59817 542 aaPredicted RBP9.63□□□□□ -0.87
TPM4-210ENST00000588507 NHLH1Q02575 133 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 EIF4A2Q14240 407 aaKnown RBP9.63□□□□□ -0.87
TPM4-210ENST00000588507 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
TPM4-210ENST00000588507 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 UNC93B1Q9H1C4 597 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 DBNDD1Q9H9R9 158 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
TPM4-210ENST00000588507 HOXD10P28358 340 aa9.62□□□□□ -0.87
TPM4-210ENST00000588507 SRRDQ9UH36 339 aa9.62□□□□□ -0.87
TPM4-210ENST00000588507 ROCK2O75116 1388 aaKnown RBP9.62□□□□□ -0.87
TPM4-210ENST00000588507 VIL1P09327 827 aaKnown RBP9.61□□□□□ -0.87
TPM4-210ENST00000588507 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
TPM4-210ENST00000588507 NECAB3Q96P71 396 aaPredicted RBP9.61□□□□□ -0.87
TPM4-210ENST00000588507 MYOZ2Q9NPC6 264 aa9.61□□□□□ -0.87
TPM4-210ENST00000588507 KCNQ5Q9NR82 932 aa9.61□□□□□ -0.87
TPM4-210ENST00000588507 RTL9Q8NET4 1388 aa9.61□□□□□ -0.87
TPM4-210ENST00000588507 SMIM22K7EJ46 135 aa9.6□□□□□ -0.87
TPM4-210ENST00000588507 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
TPM4-210ENST00000588507 ST18O60284 1047 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms