RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LAMB2P55268 1798 aa17.83■□□□□ 0.44
CCDC43-203ENST00000588210 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
CCDC43-203ENST00000588210 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
CCDC43-203ENST00000588210 RBM17Q96I25 401 aaKnown RBP17.83■□□□□ 0.44
CCDC43-203ENST00000588210 GRM8O00222 908 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 MRE11P49959 708 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 CASP7P55210 303 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 RABEP1Q15276 862 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 C9orf78Q9NZ63 289 aaPredicted RBP17.82■□□□□ 0.44
CCDC43-203ENST00000588210 UTRNP46939 3433 aa17.82■□□□□ 0.44
CCDC43-203ENST00000588210 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
CCDC43-203ENST00000588210 SKOR2Q2VWA4 1001 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-203ENST00000588210 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
CCDC43-203ENST00000588210 ARFGEF1Q9Y6D6 1849 aa17.8■□□□□ 0.44
CCDC43-203ENST00000588210 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
CCDC43-203ENST00000588210 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
CCDC43-203ENST00000588210 MEIS3Q99687 375 aa17.79■□□□□ 0.44
CCDC43-203ENST00000588210 UTYO14607 1347 aa17.79■□□□□ 0.44
CCDC43-203ENST00000588210 CCDC152Q4G0S7 254 aa17.79■□□□□ 0.44
CCDC43-203ENST00000588210 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
CCDC43-203ENST00000588210 CTSWP56202 376 aa17.78■□□□□ 0.44
CCDC43-203ENST00000588210 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-203ENST00000588210 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
CCDC43-203ENST00000588210 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-203ENST00000588210 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
CCDC43-203ENST00000588210 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
CCDC43-203ENST00000588210 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
CCDC43-203ENST00000588210 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
CCDC43-203ENST00000588210 OTUD7AQ8TE49 926 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-203ENST00000588210 PANK2Q9BZ23 570 aa17.77■□□□□ 0.44
CCDC43-203ENST00000588210 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
CCDC43-203ENST00000588210 MYH3P11055 1940 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 C21orf2O43822 256 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 HMMRO75330 724 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 BBOX1O75936 387 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 SDSP20132 328 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 GRAPQ13588 217 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-203ENST00000588210 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-203ENST00000588210 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
CCDC43-203ENST00000588210 CSF1RP07333 972 aa17.75■□□□□ 0.43
CCDC43-203ENST00000588210 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
CCDC43-203ENST00000588210 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-203ENST00000588210 FOXO4P98177 505 aa17.75■□□□□ 0.43
CCDC43-203ENST00000588210 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
CCDC43-203ENST00000588210 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
CCDC43-203ENST00000588210 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-203ENST00000588210 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
CCDC43-203ENST00000588210 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-203ENST00000588210 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
CCDC43-203ENST00000588210 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
CCDC43-203ENST00000588210 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-203ENST00000588210 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
CCDC43-203ENST00000588210 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 TMX4Q9H1E5 349 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-203ENST00000588210 SEC31BQ9NQW1 1179 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 GRIPAP1Q4V328 841 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 CCDC93Q567U6 631 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 GREM2Q9H772 168 aa17.73■□□□□ 0.43
CCDC43-203ENST00000588210 GOLGA6L22H0YM25 854 aa17.72■□□□□ 0.43
CCDC43-203ENST00000588210 REC8O95072 547 aa17.72■□□□□ 0.43
CCDC43-203ENST00000588210 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
CCDC43-203ENST00000588210 KAZALD1Q96I82 304 aa17.72■□□□□ 0.43
CCDC43-203ENST00000588210 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
CCDC43-203ENST00000588210 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
CCDC43-203ENST00000588210 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-203ENST00000588210 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-203ENST00000588210 TAF1P21675 1872 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 GNAI3P08754 354 aa17.71■□□□□ 0.43
CCDC43-203ENST00000588210 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
CCDC43-203ENST00000588210 ITGA6P23229 1130 aa17.7■□□□□ 0.42
CCDC43-203ENST00000588210 NUCB2P80303 420 aa17.7■□□□□ 0.42
CCDC43-203ENST00000588210 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-203ENST00000588210 ANKRD18AQ8IVF6 992 aa17.7■□□□□ 0.42
CCDC43-203ENST00000588210 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
CCDC43-203ENST00000588210 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
CCDC43-203ENST00000588210 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
CCDC43-203ENST00000588210 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
CCDC43-203ENST00000588210 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 LTBP3Q9NS15 1303 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 APBB1O00213 710 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 ERC2O15083 957 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 ST18O60284 1047 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 GNAI2P04899 355 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 PDE1AP54750 535 aa17.69■□□□□ 0.42
CCDC43-203ENST00000588210 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
CCDC43-203ENST00000588210 NFKBIEO00221 500 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
CCDC43-203ENST00000588210 SNED1Q8TER0 1413 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms