RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 RBM26Q5T8P6 1007 aaKnown RBP25.41■■□□□ 1.66
PTBP1-208ENST00000585956 DPF2Q92785 391 aa25.41■■□□□ 1.66
PTBP1-208ENST00000585956 CCDC85AQ96PX6 553 aaPredicted RBP25.41■■□□□ 1.66
PTBP1-208ENST00000585956 MYD88Q99836 296 aa25.41■■□□□ 1.66
PTBP1-208ENST00000585956 H7C1D1 291 aa25.4■■□□□ 1.66
PTBP1-208ENST00000585956 RPS8P62241 208 aaKnown RBP25.4■■□□□ 1.66
PTBP1-208ENST00000585956 HHIPL1Q96JK4 782 aa25.4■■□□□ 1.66
PTBP1-208ENST00000585956 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
PTBP1-208ENST00000585956 ZBTB38Q8NAP3 1195 aaPredicted RBP25.39■■□□□ 1.66
PTBP1-208ENST00000585956 PRKRIP1Q9H875 184 aaPredicted RBP25.39■■□□□ 1.66
PTBP1-208ENST00000585956 BEGAINQ9BUH8 593 aa25.38■■□□□ 1.65
PTBP1-208ENST00000585956 FAM155AB1AL88 458 aaPredicted RBP25.37■■□□□ 1.65
PTBP1-208ENST00000585956 FAM161AQ3B820 660 aa25.37■■□□□ 1.65
PTBP1-208ENST00000585956 KRT26Q7Z3Y9 468 aa25.37■■□□□ 1.65
PTBP1-208ENST00000585956 TSPYL6Q8N831 410 aa25.37■■□□□ 1.65
PTBP1-208ENST00000585956 BRPF1P55201 1214 aaPredicted RBP25.36■■□□□ 1.65
PTBP1-208ENST00000585956 HUNKP57058 714 aa25.36■■□□□ 1.65
PTBP1-208ENST00000585956 IFT57Q9NWB7 429 aa25.36■■□□□ 1.65
PTBP1-208ENST00000585956 PODXL2Q9NZ53 605 aa25.36■■□□□ 1.65
PTBP1-208ENST00000585956 PSME4Q14997 1843 aa25.35■■□□□ 1.65
PTBP1-208ENST00000585956 UFL1O94874 794 aa25.35■■□□□ 1.65
PTBP1-208ENST00000585956 VIL1P09327 827 aaKnown RBP25.35■■□□□ 1.65
PTBP1-208ENST00000585956 GOLGA2Q08379 1002 aa25.35■■□□□ 1.65
PTBP1-208ENST00000585956 ZNF646O15015 1829 aaPredicted RBP25.35■■□□□ 1.65
PTBP1-208ENST00000585956 SPEF2Q9C093 1822 aa25.35■■□□□ 1.65
PTBP1-208ENST00000585956 TNRC18O15417 2968 aaPredicted RBP25.34■■□□□ 1.65
PTBP1-208ENST00000585956 CCDC85CA6NKD9 419 aa25.34■■□□□ 1.65
PTBP1-208ENST00000585956 PCCAP05165 728 aaPredicted RBP25.33■■□□□ 1.65
PTBP1-208ENST00000585956 KIF4BQ2VIQ3 1234 aa25.33■■□□□ 1.65
PTBP1-208ENST00000585956 CCDC184Q52MB2 194 aa25.33■■□□□ 1.65
PTBP1-208ENST00000585956 MCOLN1Q9GZU1 580 aa25.33■■□□□ 1.65
PTBP1-208ENST00000585956 GGA3Q9NZ52 723 aa25.33■■□□□ 1.65
PTBP1-208ENST00000585956 SCAF8Q9UPN6 1271 aaKnown RBP25.33■■□□□ 1.65
PTBP1-208ENST00000585956 RPS12P25398 132 aaKnown RBP25.32■■□□□ 1.64
PTBP1-208ENST00000585956 EYA3Q99504 573 aa25.32■■□□□ 1.64
PTBP1-208ENST00000585956 IGKV5-2P06315 115 aa25.31■■□□□ 1.64
PTBP1-208ENST00000585956 METTL22Q9BUU2 404 aaPredicted RBP25.31■■□□□ 1.64
PTBP1-208ENST00000585956 GBA2Q9HCG7 927 aaPredicted RBP25.31■■□□□ 1.64
PTBP1-208ENST00000585956 ANKIB1Q9P2G1 1089 aa25.31■■□□□ 1.64
PTBP1-208ENST00000585956 GNAI1P63096 354 aa25.3■■□□□ 1.64
PTBP1-208ENST00000585956 CCDC191Q8NCU4 936 aa25.3■■□□□ 1.64
PTBP1-208ENST00000585956 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
PTBP1-208ENST00000585956 ZC3H12CQ9C0D7 883 aaKnown RBP25.3■■□□□ 1.64
PTBP1-208ENST00000585956 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
PTBP1-208ENST00000585956 GGA1Q9UJY5 639 aa25.3■■□□□ 1.64
PTBP1-208ENST00000585956 PDE8AO60658 829 aa25.29■■□□□ 1.64
PTBP1-208ENST00000585956 RGMBQ6NW40 437 aa25.29■■□□□ 1.64
PTBP1-208ENST00000585956 GMLQ99445 158 aa25.29■■□□□ 1.64
PTBP1-208ENST00000585956 MXD3Q9BW11 206 aa25.29■■□□□ 1.64
PTBP1-208ENST00000585956 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
PTBP1-208ENST00000585956 ZNF280AP59817 542 aaPredicted RBP25.28■■□□□ 1.64
PTBP1-208ENST00000585956 NOGQ13253 232 aa25.28■■□□□ 1.64
PTBP1-208ENST00000585956 CCDC152Q4G0S7 254 aa25.28■■□□□ 1.64
PTBP1-208ENST00000585956 DCPSQ96C86 337 aaKnown RBP25.28■■□□□ 1.64
PTBP1-208ENST00000585956 KIF23Q02241 960 aaPredicted RBP25.27■■□□□ 1.64
PTBP1-208ENST00000585956 RSBN1LQ6PCB5 846 aaPredicted RBP25.27■■□□□ 1.64
PTBP1-208ENST00000585956 G2E3Q7L622 706 aa25.27■■□□□ 1.64
PTBP1-208ENST00000585956 CDCA5Q96FF9 252 aa25.27■■□□□ 1.64
PTBP1-208ENST00000585956 ZNF609O15014 1411 aa25.27■■□□□ 1.64
PTBP1-208ENST00000585956 CA12O43570 354 aa25.26■■□□□ 1.63
PTBP1-208ENST00000585956 SCARF1Q14162 830 aa25.26■■□□□ 1.63
PTBP1-208ENST00000585956 ANGEL2Q5VTE6 544 aaKnown RBP25.26■■□□□ 1.63
PTBP1-208ENST00000585956 MYH3P11055 1940 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 PI4KAP2A4QPH2 592 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 CTSWP56202 376 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 CWF19L2Q2TBE0 894 aaKnown RBP25.25■■□□□ 1.63
PTBP1-208ENST00000585956 MOB2Q70IA6 237 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 PI4KAP1Q8N8J0 262 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 GREM2Q9H772 168 aa25.25■■□□□ 1.63
PTBP1-208ENST00000585956 RGS19P49795 217 aa25.24■■□□□ 1.63
PTBP1-208ENST00000585956 ZNF157P51786 506 aaPredicted RBP25.24■■□□□ 1.63
PTBP1-208ENST00000585956 DGKZQ13574 1117 aa25.24■■□□□ 1.63
PTBP1-208ENST00000585956 C2orf69Q8N8R5 385 aa25.24■■□□□ 1.63
PTBP1-208ENST00000585956 TTLL11Q8NHH1 800 aa25.24■■□□□ 1.63
PTBP1-208ENST00000585956 XDHP47989 1333 aa25.23■■□□□ 1.63
PTBP1-208ENST00000585956 SLC10A3P09131 477 aa25.23■■□□□ 1.63
PTBP1-208ENST00000585956 TXNRD3Q86VQ6 643 aa25.23■■□□□ 1.63
PTBP1-208ENST00000585956 ANKRD18AQ8IVF6 992 aa25.23■■□□□ 1.63
PTBP1-208ENST00000585956 KLRK1P26718 216 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 CCDC30Q5VVM6 783 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 PRAMEF18Q5VWM3 479 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 SULF1Q8IWU6 871 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 AGBL3Q8NEM8 1001 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 RNF186Q9NXI6 227 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 MINPP1Q9UNW1 487 aa25.22■■□□□ 1.63
PTBP1-208ENST00000585956 KSR2Q6VAB6 950 aa25.21■■□□□ 1.63
PTBP1-208ENST00000585956 CSRNP1Q96S65 589 aa25.21■■□□□ 1.63
PTBP1-208ENST00000585956 MYOZ2Q9NPC6 264 aa25.21■■□□□ 1.63
PTBP1-208ENST00000585956 G3V3G9 751 aa25.2■■□□□ 1.62
PTBP1-208ENST00000585956 ATP2B4P23634 1241 aa25.2■■□□□ 1.62
PTBP1-208ENST00000585956 DCAF8Q5TAQ9 597 aa25.2■■□□□ 1.62
PTBP1-208ENST00000585956 RASAL3Q86YV0 1011 aa25.2■■□□□ 1.62
PTBP1-208ENST00000585956 NEURL1BA8MQ27 555 aa25.19■■□□□ 1.62
PTBP1-208ENST00000585956 TRPA1O75762 1119 aa25.19■■□□□ 1.62
PTBP1-208ENST00000585956 USP17L8P0C7I0 530 aa25.19■■□□□ 1.62
PTBP1-208ENST00000585956 CALD1Q05682 793 aaKnown RBP25.19■■□□□ 1.62
PTBP1-208ENST00000585956 NBPF9Q3BBW0 867 aa25.19■■□□□ 1.62
PTBP1-208ENST00000585956 PAPPA2Q9BXP8 1791 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 AKAP11Q9UKA4 1901 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 USP17L3A6NCW0 530 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms