RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 LEMD3Q9Y2U8 911 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 SCN4AP35499 1836 aa17.33■□□□□ 0.36
PRKCSH-202ENST00000585540 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 GPSM2P81274 684 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 GPC2Q8N158 579 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 COL4A1P02462 1669 aa17.32■□□□□ 0.36
PRKCSH-202ENST00000585540 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 VEGFAP15692 232 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 AOC3Q16853 763 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 ZNRF3Q9ULT6 936 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
PRKCSH-202ENST00000585540 UFL1O94874 794 aa17.3■□□□□ 0.36
PRKCSH-202ENST00000585540 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-202ENST00000585540 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
PRKCSH-202ENST00000585540 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-202ENST00000585540 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-202ENST00000585540 KIF3CO14782 793 aa17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 TNIP1Q15025 636 aa17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 ZNF526Q8TF50 670 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 CHMP4BQ9H444 224 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
PRKCSH-202ENST00000585540 MROH5Q6ZUA9 1318 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 TOMM70O94826 608 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 LDHAL6AQ6ZMR3 332 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 ZNF609O15014 1411 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 A0A1B0GUL6 1792 aa17.28■□□□□ 0.36
PRKCSH-202ENST00000585540 COL4A5P29400 1685 aa17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 CHRNDQ07001 517 aa17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 C15orf52Q6ZUT6 534 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 PODNQ7Z5L7 613 aa17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-202ENST00000585540 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 G3V3G9 751 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 KCNJ4P48050 445 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 MTX1Q13505 466 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 DCAF8Q5TAQ9 597 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 CIAPIN1Q6FI81 312 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
PRKCSH-202ENST00000585540 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 GNAI2P04899 355 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 RPS12P25398 132 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 MMP14P50281 582 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 FSTL1Q12841 308 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 MEIS3Q99687 375 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 PSME4Q14997 1843 aa17.25■□□□□ 0.35
PRKCSH-202ENST00000585540 ECE2O60344 883 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 RRAGCQ9HB90 399 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
PRKCSH-202ENST00000585540 CIAO1O76071 339 aa17.23■□□□□ 0.35
PRKCSH-202ENST00000585540 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
PRKCSH-202ENST00000585540 DPF2Q92785 391 aa17.23■□□□□ 0.35
PRKCSH-202ENST00000585540 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-202ENST00000585540 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 C1QTNF8P60827 252 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 CXCL9Q07325 125 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
PRKCSH-202ENST00000585540 EYA2O00167 538 aa17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
PRKCSH-202ENST00000585540 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 POTECB2RU33 542 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 AGBL3Q8NEM8 1001 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
PRKCSH-202ENST00000585540 EPHX2P34913 555 aa17.19■□□□□ 0.34
PRKCSH-202ENST00000585540 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-202ENST00000585540 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
PRKCSH-202ENST00000585540 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-202ENST00000585540 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms