RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-236ENST00000584991 BAG6P46379 1132 aa18.13■□□□□ 0.49
CDK5RAP3-236ENST00000584991 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-236ENST00000584991 STAP2Q9UGK3 403 aa18.13■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CARMIL3Q8ND23 1372 aa18.13■□□□□ 0.49
CDK5RAP3-236ENST00000584991 AK9Q5TCS8 1911 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CIAO1O76071 339 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 IL15P40933 162 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
CDK5RAP3-236ENST00000584991 NPHP1O15259 732 aa18.11■□□□□ 0.49
CDK5RAP3-236ENST00000584991 MCM2P49736 904 aa18.11■□□□□ 0.49
CDK5RAP3-236ENST00000584991 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
CDK5RAP3-236ENST00000584991 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TM4SF1P30408 202 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TNNI3KQ59H18 835 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 FPGT-TNNI3KV9GXZ4 949 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 AOX1Q06278 1338 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
CDK5RAP3-236ENST00000584991 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SF3B3Q15393 1217 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SLC15A2Q16348 729 aa18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 KLHL40Q2TBA0 621 aa18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
CDK5RAP3-236ENST00000584991 RTL9Q8NET4 1388 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 SERPINB2P05120 415 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CYP2E1P05181 493 aaPredicted RBP18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 ANAPC15P60006 121 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CNBD1Q8NA66 436 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 NLRP3Q96P20 1036 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 STK32BQ9NY57 414 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.49
CDK5RAP3-236ENST00000584991 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.48
CDK5RAP3-236ENST00000584991 TAF1P21675 1872 aa18.08■□□□□ 0.48
CDK5RAP3-236ENST00000584991 PI4K2BQ8TCG2 481 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 BAG4O95429 457 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 DDR1Q08345 913 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 GPR108Q9NPR9 543 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
CDK5RAP3-236ENST00000584991 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
CDK5RAP3-236ENST00000584991 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-236ENST00000584991 LRP5O75197 1615 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 MCCP23508 829 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 TIMM10P62072 90 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 COL4A1P02462 1669 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 DBNDD2Q9BQY9 259 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
CDK5RAP3-236ENST00000584991 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
CDK5RAP3-236ENST00000584991 ZNF609O15014 1411 aa18.04■□□□□ 0.48
CDK5RAP3-236ENST00000584991 A0A1B0GUL7 405 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 ST5P78524 1137 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 CCDC125Q86Z20 511 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 CLCN1P35523 988 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
CDK5RAP3-236ENST00000584991 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
CDK5RAP3-236ENST00000584991 VGLL2Q8N8G2 317 aa18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PDE8BO95263 885 aa18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 DDX49Q9Y6V7 483 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-236ENST00000584991 MMP10P09238 476 aa18■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ZNF445P59923 1031 aa18■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ATP2B3Q16720 1220 aa18■□□□□ 0.47
CDK5RAP3-236ENST00000584991 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-236ENST00000584991 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
CDK5RAP3-236ENST00000584991 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ATP5JP18859 108 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 XAGE2Q96GT9 111 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms