RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
GGA3-209ENST00000580646 COL4A5P29400 1685 aa12.47□□□□□ -0.41
GGA3-209ENST00000580646 GRM8O00222 908 aa12.46□□□□□ -0.41
GGA3-209ENST00000580646 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
GGA3-209ENST00000580646 LDHDQ86WU2 507 aa12.46□□□□□ -0.41
GGA3-209ENST00000580646 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.46□□□□□ -0.41
GGA3-209ENST00000580646 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
GGA3-209ENST00000580646 TAF1P21675 1872 aa12.46□□□□□ -0.42
GGA3-209ENST00000580646 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
GGA3-209ENST00000580646 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
GGA3-209ENST00000580646 GPSM2P81274 684 aa12.45□□□□□ -0.42
GGA3-209ENST00000580646 CXCL9Q07325 125 aa12.45□□□□□ -0.42
GGA3-209ENST00000580646 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
GGA3-209ENST00000580646 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
GGA3-209ENST00000580646 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
GGA3-209ENST00000580646 LRRC37AA6NMS7 1700 aa12.45□□□□□ -0.42
GGA3-209ENST00000580646 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 SCNN1DP51172 638 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 CTSWP56202 376 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
GGA3-209ENST00000580646 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 C9orf78Q9NZ63 289 aaPredicted RBP12.44□□□□□ -0.42
GGA3-209ENST00000580646 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
GGA3-209ENST00000580646 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 RAD17O75943 681 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 EPS15P42566 896 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 FTSJ3Q8IY81 847 aaKnown RBP12.43□□□□□ -0.42
GGA3-209ENST00000580646 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 USP44Q9H0E7 712 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
GGA3-209ENST00000580646 SCN4AP35499 1836 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 ITGBL1O95965 494 aaPredicted RBP12.42□□□□□ -0.42
GGA3-209ENST00000580646 CSF1RP07333 972 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 TNIP1Q15025 636 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
GGA3-209ENST00000580646 EYA3Q99504 573 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 ANKIB1Q9P2G1 1089 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 COL4A1P02462 1669 aa12.42□□□□□ -0.42
GGA3-209ENST00000580646 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 NBPF7P0C2Y1 421 aaPredicted RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 HSPA1AP0DMV8 641 aaKnown RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 HSPA1BP0DMV9 641 aaKnown RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 ZC3H12CQ9C0D7 883 aaKnown RBP12.41□□□□□ -0.42
GGA3-209ENST00000580646 GREM2Q9H772 168 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 GPRC5DQ9NZD1 345 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 GGA1Q9UJY5 639 aa12.41□□□□□ -0.42
GGA3-209ENST00000580646 PASKQ96RG2 1323 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 DUOX1Q9NRD9 1551 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 UFL1O94874 794 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 GNAI3P08754 354 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 FOXO4P98177 505 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
GGA3-209ENST00000580646 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
GGA3-209ENST00000580646 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
GGA3-209ENST00000580646 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
GGA3-209ENST00000580646 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
GGA3-209ENST00000580646 LTBP1Q14766 1721 aa12.4□□□□□ -0.43
GGA3-209ENST00000580646 ECE2O60344 883 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 UBTFL1P0CB47 393 aaPredicted RBP12.39□□□□□ -0.43
GGA3-209ENST00000580646 RLBP1P12271 317 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
GGA3-209ENST00000580646 KAZALD1Q96I82 304 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
GGA3-209ENST00000580646 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
GGA3-209ENST00000580646 XDHP47989 1333 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 G3V3G9 751 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 PSMD14O00487 310 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 ITGA6P23229 1130 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
GGA3-209ENST00000580646 MVPQ14764 893 aaKnown RBP12.38□□□□□ -0.43
GGA3-209ENST00000580646 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 KCNQ5Q9NR82 932 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
GGA3-209ENST00000580646 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
GGA3-209ENST00000580646 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
GGA3-209ENST00000580646 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
GGA3-209ENST00000580646 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
GGA3-209ENST00000580646 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
GGA3-209ENST00000580646 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
GGA3-209ENST00000580646 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms