RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 EYA3Q99504 573 aa18.23■□□□□ 0.51
MKS1-207ENST00000578789 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
MKS1-207ENST00000578789 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
MKS1-207ENST00000578789 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
MKS1-207ENST00000578789 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
MKS1-207ENST00000578789 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
MKS1-207ENST00000578789 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 GPC2Q8N158 579 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 GGA1Q9UJY5 639 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 ZNRF3Q9ULT6 936 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 MINPP1Q9UNW1 487 aa18.22■□□□□ 0.51
MKS1-207ENST00000578789 C6orf229H3BNL8 230 aa18.21■□□□□ 0.51
MKS1-207ENST00000578789 TOMM70O94826 608 aa18.21■□□□□ 0.51
MKS1-207ENST00000578789 UFL1O94874 794 aa18.21■□□□□ 0.51
MKS1-207ENST00000578789 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
MKS1-207ENST00000578789 TRIM27P14373 513 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 INTS3Q68E01 1043 aaKnown RBP18.2■□□□□ 0.5
MKS1-207ENST00000578789 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
MKS1-207ENST00000578789 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 PSME4Q14997 1843 aa18.2■□□□□ 0.5
MKS1-207ENST00000578789 IQCA1LA6NCM1 817 aa18.19■□□□□ 0.5
MKS1-207ENST00000578789 CCDC57Q2TAC2 916 aa18.19■□□□□ 0.5
MKS1-207ENST00000578789 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
MKS1-207ENST00000578789 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 CXCL9Q07325 125 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
MKS1-207ENST00000578789 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
MKS1-207ENST00000578789 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
MKS1-207ENST00000578789 ANKRD2Q9GZV1 360 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 SCN9AQ15858 1988 aa18.18■□□□□ 0.5
MKS1-207ENST00000578789 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
MKS1-207ENST00000578789 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
MKS1-207ENST00000578789 ECE2O60344 883 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 UBTFL1P0CB47 393 aaPredicted RBP18.16■□□□□ 0.5
MKS1-207ENST00000578789 CHRNDQ07001 517 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 CIAPIN1Q6FI81 312 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
MKS1-207ENST00000578789 ZC3H12CQ9C0D7 883 aaKnown RBP18.16■□□□□ 0.5
MKS1-207ENST00000578789 DBNDD1Q9H9R9 158 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
MKS1-207ENST00000578789 ZNF646O15015 1829 aaPredicted RBP18.16■□□□□ 0.5
MKS1-207ENST00000578789 SCNN1DP51172 638 aa18.15■□□□□ 0.5
MKS1-207ENST00000578789 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
MKS1-207ENST00000578789 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
MKS1-207ENST00000578789 HACL1Q9UJ83 578 aa18.15■□□□□ 0.5
MKS1-207ENST00000578789 WTIPA6NIX2 430 aaPredicted RBP18.14■□□□□ 0.49
MKS1-207ENST00000578789 FSTL1Q12841 308 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 TNIP1Q15025 636 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 MEIS3Q99687 375 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 ZNF609O15014 1411 aa18.14■□□□□ 0.49
MKS1-207ENST00000578789 RAD17O75943 681 aa18.13■□□□□ 0.49
MKS1-207ENST00000578789 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
MKS1-207ENST00000578789 SMC1BQ8NDV3 1235 aa18.13■□□□□ 0.49
MKS1-207ENST00000578789 IRS2Q9Y4H2 1338 aa18.13■□□□□ 0.49
MKS1-207ENST00000578789 GNAI3P08754 354 aa18.12■□□□□ 0.49
MKS1-207ENST00000578789 LMOD1P29536 600 aaPredicted RBP18.12■□□□□ 0.49
MKS1-207ENST00000578789 EPHX2P34913 555 aa18.12■□□□□ 0.49
MKS1-207ENST00000578789 RFX5P48382 616 aaPredicted RBP18.12■□□□□ 0.49
MKS1-207ENST00000578789 MAPK8IP2Q13387 824 aaPredicted RBP18.12■□□□□ 0.49
MKS1-207ENST00000578789 C15orf52Q6ZUT6 534 aaKnown RBP18.12■□□□□ 0.49
MKS1-207ENST00000578789 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
MKS1-207ENST00000578789 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
MKS1-207ENST00000578789 GMPSP49915 693 aaPredicted RBP18.11■□□□□ 0.49
MKS1-207ENST00000578789 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
MKS1-207ENST00000578789 PUS3Q9BZE2 481 aaKnown RBP18.11■□□□□ 0.49
MKS1-207ENST00000578789 GPRC5DQ9NZD1 345 aa18.11■□□□□ 0.49
MKS1-207ENST00000578789 LRRFIP2Q9Y608 721 aaKnown RBP18.11■□□□□ 0.49
MKS1-207ENST00000578789 MROH5Q6ZUA9 1318 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 PSMD14O00487 310 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 TAF5LO75529 589 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 KLRK1P26718 216 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 PODNQ7Z5L7 613 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 PNMA8AQ86V59 439 aaPredicted RBP18.1■□□□□ 0.49
MKS1-207ENST00000578789 TXNRD3Q86VQ6 643 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 HELBQ8NG08 1087 aaPredicted RBP18.1■□□□□ 0.49
MKS1-207ENST00000578789 COA1Q9GZY4 146 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
MKS1-207ENST00000578789 G3V3G9 751 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 POTEJP0CG39 1038 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 EPS15P42566 896 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 KCNJ4P48050 445 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 FTSJ3Q8IY81 847 aaKnown RBP18.09■□□□□ 0.49
MKS1-207ENST00000578789 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
MKS1-207ENST00000578789 KCNQ5Q9NR82 932 aa18.09■□□□□ 0.49
MKS1-207ENST00000578789 VIL1P09327 827 aaKnown RBP18.08■□□□□ 0.48
MKS1-207ENST00000578789 RLBP1P12271 317 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms