RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-208	ENST00000578525	CDHR2	Q9BYE9	1310 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525		A0A1B0GUL7	405 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	VPS37C	A5D8V6	355 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	LETM1	O95202	739 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	STARD3NL	O95772	234 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	IFIT1	P09914	478 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CCDC57	Q2TAC2	916 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	HSP90AB3P	Q58FF7	597 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	LARP1B	Q659C4	914 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	PDLIM2	Q96JY6	352 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	SEC62	Q99442	399 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	PUS3	Q9BZE2	481 aa	Known RBP	11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	ASAP1	Q9ULH1	1129 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	AKAP2	Q9Y2D5	859 aa		11.11	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	COL16A1	Q07092	1604 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	RNF113A	O15541	343 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	FIBP	O43427	364 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CSF1R	P07333	972 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	TIMM10	P62072	90 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	COL9A3	Q14050	684 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	HS1BP3	Q53T59	392 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	TCEANC2	Q96MN5	208 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	BTG4	Q9NY30	223 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CCDC9	Q9Y3X0	531 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	ABCC12	Q96J65	1359 aa		11.1	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	BCL9	O00512	1426 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	RIC1	Q4ADV7	1423 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CHGB	P05060	677 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CYP21A2	P08686	494 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	HMGB1	P09429	215 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	DNM1	Q05193	864 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	CCDC158	Q5M9N0	1113 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	TTC39A	Q5SRH9	613 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525		Q6ZUG5	572 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	GTF3C6	Q969F1	213 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	MAST3	O60307	1309 aa		11.09	□□□□□ -0.63
CDK5RAP3-208	ENST00000578525	LAMA4	Q16363	1823 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CYP19A1	P11511	503 aa	Predicted RBP	11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	HSP90B1	P14625	803 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	KRT85	P78386	507 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	IFIT5	Q13325	482 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	UVSSA	Q2YD98	709 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	TAF7L	Q5H9L4	462 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	STOX1	Q6ZVD7	989 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ZSCAN30	Q86W11	494 aa		11.08	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	LRP5	O75197	1615 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ZFY	P08048	801 aa	Predicted RBP	11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ADORA1	P30542	326 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	STK3	Q13188	491 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	GORAB	Q5T7V8	394 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CDC37L1	Q7L3B6	337 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	DHX32	Q7L7V1	743 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	NLRP10	Q86W26	655 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	FAM184A	Q8NB25	1140 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	FAM89A	Q96GI7	184 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	XAGE2	Q96GT9	111 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	LLPH	Q9BRT6	129 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ROBO1	Q9Y6N7	1651 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ELP1	O95163	1332 aa		11.07	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	DOT1L	Q8TEK3	1739 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	TCHH	Q07283	1943 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525		M0R2C6	588 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	PFKFB2	O60825	505 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	HSPD1	P10809	573 aa	Known RBP	11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CTSW	P56202	376 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	EXOSC10	Q01780	885 aa	Known RBP	11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	HLF	Q16534	295 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	RNF214	Q8ND24	703 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	SMARCC2	Q8TAQ2	1214 aa		11.06	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ANKRD18B	A2A2Z9	1011 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ERVV-1	B6SEH8	477 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	EXOC5	O00471	708 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	DTNB	O60941	627 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	FGD1	P98174	961 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	REST	Q13127	1097 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ATP2B3	Q16720	1220 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	SLFNL1	Q499Z3	407 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	TTC6	Q86TZ1	520 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	BRF1	Q92994	677 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CHMP4C	Q96CF2	233 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	SLC4A9	Q96Q91	983 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	AGXT2	Q9BYV1	514 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CCDC39	Q9UFE4	941 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	CTNNA3	Q9UI47	895 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ZBTB1	Q9Y2K1	713 aa		11.05	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	RREB1	Q92766	1687 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	NRAP	Q86VF7	1730 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	ARAP2	Q8WZ64	1704 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	MYH3	P11055	1940 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525		E7EWF7	191 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	JAK2	O60674	1132 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	GPT	P24298	496 aa		11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	MSN	P26038	577 aa	Known RBP	11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	IL6ST	P40189	918 aa	Predicted RBP	11.04	□□□□□ -0.64
CDK5RAP3-208	ENST00000578525	HMGN5	P82970	282 aa	Known RBP	11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms