RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-204	ENST00000577393	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	HACL1	Q9UJ83	578 aa		33.38	■■■□□ 2.93
PPP4R1-204	ENST00000577393	SCN4A	P35499	1836 aa		33.37	■■■□□ 2.93
PPP4R1-204	ENST00000577393	BRPF1	P55201	1214 aa	Predicted RBP	33.37	■■■□□ 2.93
PPP4R1-204	ENST00000577393	NOB1	Q9ULX3	412 aa	Known RBP	33.37	■■■□□ 2.93
PPP4R1-204	ENST00000577393	MINPP1	Q9UNW1	487 aa		33.37	■■■□□ 2.93
PPP4R1-204	ENST00000577393	XDH	P47989	1333 aa		33.36	■■■□□ 2.93
PPP4R1-204	ENST00000577393	ANKRD18B	A2A2Z9	1011 aa		33.35	■■■□□ 2.93
PPP4R1-204	ENST00000577393	YDJC	A8MPS7	323 aa		33.35	■■■□□ 2.93
PPP4R1-204	ENST00000577393	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.35	■■■□□ 2.93
PPP4R1-204	ENST00000577393	LMBR1L	Q6UX01	489 aa		33.35	■■■□□ 2.93
PPP4R1-204	ENST00000577393	CHMP3	Q9Y3E7	222 aa		33.35	■■■□□ 2.93
PPP4R1-204	ENST00000577393	UTY	O14607	1347 aa		33.34	■■■□□ 2.93
PPP4R1-204	ENST00000577393	SUCLG2	Q96I99	432 aa		33.34	■■■□□ 2.93
PPP4R1-204	ENST00000577393	ZC3H12C	Q9C0D7	883 aa	Known RBP	33.34	■■■□□ 2.93
PPP4R1-204	ENST00000577393	DBNDD1	Q9H9R9	158 aa		33.34	■■■□□ 2.93
PPP4R1-204	ENST00000577393	SPEF2	Q9C093	1822 aa		33.34	■■■□□ 2.93
PPP4R1-204	ENST00000577393	RAD17	O75943	681 aa		33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	POTEI	P0CG38	1075 aa		33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	POTEJ	P0CG39	1038 aa		33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	IFIT5	Q13325	482 aa	Known RBP	33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	CIAPIN1	Q6FI81	312 aa		33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	MPHOSPH8	Q99549	860 aa		33.33	■■■□□ 2.93
PPP4R1-204	ENST00000577393	ATP2B4	P23634	1241 aa		33.32	■■■□□ 2.92
PPP4R1-204	ENST00000577393	EPHX2	P34913	555 aa		33.32	■■■□□ 2.92
PPP4R1-204	ENST00000577393	SCNN1D	P51172	638 aa		33.32	■■■□□ 2.92
PPP4R1-204	ENST00000577393	DOK7	Q18PE1	504 aa		33.32	■■■□□ 2.92
PPP4R1-204	ENST00000577393	KAZALD1	Q96I82	304 aa		33.31	■■■□□ 2.92
PPP4R1-204	ENST00000577393	LMOD1	P29536	600 aa	Predicted RBP	33.3	■■■□□ 2.92
PPP4R1-204	ENST00000577393	TNIP1	Q15025	636 aa		33.3	■■■□□ 2.92
PPP4R1-204	ENST00000577393	WTIP	A6NIX2	430 aa	Predicted RBP	33.29	■■■□□ 2.92
PPP4R1-204	ENST00000577393	ECE2	O60344	883 aa		33.29	■■■□□ 2.92
PPP4R1-204	ENST00000577393	EAPP	Q56P03	285 aa	Predicted RBP	33.29	■■■□□ 2.92
PPP4R1-204	ENST00000577393	API5	Q9BZZ5	524 aa	Known RBP	33.29	■■■□□ 2.92
PPP4R1-204	ENST00000577393	ZBED9	Q6R2W3	1325 aa		33.28	■■■□□ 2.92
PPP4R1-204	ENST00000577393	EPS15	P42566	896 aa		33.28	■■■□□ 2.92
PPP4R1-204	ENST00000577393	CCDC57	Q2TAC2	916 aa		33.28	■■■□□ 2.92
PPP4R1-204	ENST00000577393	CHADL	Q6NUI6	762 aa		33.28	■■■□□ 2.92
PPP4R1-204	ENST00000577393	USP44	Q9H0E7	712 aa		33.28	■■■□□ 2.92
PPP4R1-204	ENST00000577393	CCT4	P50991	539 aa	Known RBP	33.27	■■■□□ 2.92
PPP4R1-204	ENST00000577393	LDHD	Q86WU2	507 aa		33.27	■■■□□ 2.92
PPP4R1-204	ENST00000577393	GMPS	P49915	693 aa	Predicted RBP	33.26	■■■□□ 2.91
PPP4R1-204	ENST00000577393	APLP1	P51693	650 aa		33.26	■■■□□ 2.91
PPP4R1-204	ENST00000577393	PNMA8A	Q86V59	439 aa	Predicted RBP	33.26	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ANKRD2	Q9GZV1	360 aa		33.26	■■■□□ 2.91
PPP4R1-204	ENST00000577393	KIF16B	Q96L93	1317 aa		33.26	■■■□□ 2.91
PPP4R1-204	ENST00000577393		G3V3G9	751 aa		33.25	■■■□□ 2.91
PPP4R1-204	ENST00000577393	DCAF8	Q5TAQ9	597 aa		33.25	■■■□□ 2.91
PPP4R1-204	ENST00000577393	BICC1	Q9H694	974 aa	Known RBP	33.25	■■■□□ 2.91
PPP4R1-204	ENST00000577393	KCNQ5	Q9NR82	932 aa		33.25	■■■□□ 2.91
PPP4R1-204	ENST00000577393	GPRC5D	Q9NZD1	345 aa		33.25	■■■□□ 2.91
PPP4R1-204	ENST00000577393	PSMD14	O00487	310 aa		33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	CHRND	Q07001	517 aa		33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ARHGAP45	Q92619	1136 aa		33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ZNF594	Q96JF6	807 aa	Predicted RBP	33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	LEMD3	Q9Y2U8	911 aa		33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	CEP350	Q5VT06	3117 aa		33.24	■■■□□ 2.91
PPP4R1-204	ENST00000577393	BCAR3	O75815	825 aa		33.23	■■■□□ 2.91
PPP4R1-204	ENST00000577393	TAF7L	Q5H9L4	462 aa		33.23	■■■□□ 2.91
PPP4R1-204	ENST00000577393	CLEC11A	Q9Y240	323 aa		33.23	■■■□□ 2.91
PPP4R1-204	ENST00000577393	RABL6	Q3YEC7	729 aa	Predicted RBP	33.22	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ANKRD44	Q8N8A2	993 aa		33.21	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ZBTB12	Q9Y330	459 aa	Predicted RBP	33.21	■■■□□ 2.91
PPP4R1-204	ENST00000577393	MED23	Q9ULK4	1368 aa		33.21	■■■□□ 2.91
PPP4R1-204	ENST00000577393	LDHAL6A	Q6ZMR3	332 aa		33.2	■■■□□ 2.91
PPP4R1-204	ENST00000577393	ZNF804B	A4D1E1	1349 aa		33.2	■■■□□ 2.91
PPP4R1-204	ENST00000577393	HELB	Q8NG08	1087 aa	Predicted RBP	33.19	■■■□□ 2.9
PPP4R1-204	ENST00000577393	ADAMTSL1	Q8N6G6	1762 aa		33.19	■■■□□ 2.9
PPP4R1-204	ENST00000577393	IPO8	O15397	1037 aa	Known RBP	33.18	■■■□□ 2.9
PPP4R1-204	ENST00000577393	USP50	Q70EL3	339 aa	Predicted RBP	33.18	■■■□□ 2.9
PPP4R1-204	ENST00000577393	ADARB2	Q9NS39	739 aa	Known RBP	33.18	■■■□□ 2.9
PPP4R1-204	ENST00000577393	SCN9A	Q15858	1988 aa		33.18	■■■□□ 2.9
PPP4R1-204	ENST00000577393	TAF5L	O75529	589 aa		33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	KCNJ4	P48050	445 aa		33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	TXNRD3	Q86VQ6	643 aa		33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	FRAT1	Q92837	279 aa	Predicted RBP	33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	CNNM1	Q9NRU3	951 aa		33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	CNOT7	Q9UIV1	285 aa	Known RBP	33.17	■■■□□ 2.9
PPP4R1-204	ENST00000577393	HTRA3	P83110	453 aa		33.16	■■■□□ 2.9
PPP4R1-204	ENST00000577393	PODN	Q7Z5L7	613 aa		33.16	■■■□□ 2.9
PPP4R1-204	ENST00000577393	DPF2	Q92785	391 aa		33.16	■■■□□ 2.9
PPP4R1-204	ENST00000577393	SNAP23	O00161	211 aa		33.15	■■■□□ 2.9
PPP4R1-204	ENST00000577393	VIL1	P09327	827 aa	Known RBP	33.15	■■■□□ 2.9
PPP4R1-204	ENST00000577393	KLRK1	P26718	216 aa		33.15	■■■□□ 2.9
PPP4R1-204	ENST00000577393	SHTN1	A0MZ66	631 aa		33.14	■■■□□ 2.9
PPP4R1-204	ENST00000577393	TRIM27	P14373	513 aa		33.14	■■■□□ 2.9
PPP4R1-204	ENST00000577393	MAP1S	Q66K74	1059 aa	Predicted RBP	33.14	■■■□□ 2.9
PPP4R1-204	ENST00000577393	INTS3	Q68E01	1043 aa	Known RBP	33.14	■■■□□ 2.9
PPP4R1-204	ENST00000577393	PUS3	Q9BZE2	481 aa	Known RBP	33.14	■■■□□ 2.9
PPP4R1-204	ENST00000577393	UBTFL1	P0CB47	393 aa	Predicted RBP	33.13	■■■□□ 2.89
PPP4R1-204	ENST00000577393	RPS12	P25398	132 aa	Known RBP	33.13	■■■□□ 2.89
PPP4R1-204	ENST00000577393	ATF7IP	Q6VMQ6	1270 aa		33.13	■■■□□ 2.89
PPP4R1-204	ENST00000577393	MICALL2	Q8IY33	904 aa		33.13	■■■□□ 2.89
PPP4R1-204	ENST00000577393	TNN	Q9UQP3	1299 aa		33.13	■■■□□ 2.89
PPP4R1-204	ENST00000577393		H7C1D1	291 aa		33.12	■■■□□ 2.89
PPP4R1-204	ENST00000577393	PLIN1	O60240	522 aa		33.12	■■■□□ 2.89
PPP4R1-204	ENST00000577393	ITGBL1	O95965	494 aa	Predicted RBP	33.12	■■■□□ 2.89
PPP4R1-204	ENST00000577393	CNTROB	Q8N137	903 aa		33.12	■■■□□ 2.89
PPP4R1-204	ENST00000577393	COA1	Q9GZY4	146 aa		33.12	■■■□□ 2.89
PPP4R1-204	ENST00000577393	PASK	Q96RG2	1323 aa		33.1	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms