RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SPECC1Q5M775 1068 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 CCDC150Q8NCX0 1101 aa20.63■□□□□ 0.89
ATPAF1-214ENST00000576409 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 SSRP1Q08945 709 aaKnown RBP20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 STIM1Q13586 685 aa20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 ZNF397Q8NF99 534 aaPredicted RBP20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 KIF2CQ99661 725 aa20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 TRMT112Q9UI30 125 aaKnown RBP20.62■□□□□ 0.89
ATPAF1-214ENST00000576409 HELBQ8NG08 1087 aaPredicted RBP20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 ARFGAP3Q9NP61 516 aa20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 FLT4P35916 1363 aa20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 KCNG4Q8TDN1 519 aa20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 ABCC2Q92887 1545 aa20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
ATPAF1-214ENST00000576409 IL17REQ8NFR9 667 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 CABLES1Q8TDN4 633 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 CWC25Q9NXE8 425 aaPredicted RBP20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 ZNF518AQ6AHZ1 1483 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 N4BP3O15049 544 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 SUCLG2Q96I99 432 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 GTPBP4Q9BZE4 634 aaKnown RBP20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 A0A0D9SFI3 127 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 HOXC9P31274 260 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 TERF1P54274 439 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 OGFRQ9NZT2 677 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 LARGE1O95461 756 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 WASF1Q92558 559 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 CLSTN2Q9H4D0 955 aa20.6■□□□□ 0.89
ATPAF1-214ENST00000576409 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 SLC9C2Q5TAH2 1124 aa20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 ZNF215Q9UL58 517 aaPredicted RBP20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 ATP10AO60312 1499 aa20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 PTPN21Q16825 1174 aa20.59■□□□□ 0.89
ATPAF1-214ENST00000576409 ZBTB43O43298 467 aa20.58■□□□□ 0.89
ATPAF1-214ENST00000576409 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.89
ATPAF1-214ENST00000576409 ZDHHC9Q9Y397 364 aa20.58■□□□□ 0.89
ATPAF1-214ENST00000576409 DRC1Q96MC2 740 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 RHOXF2BP0C7M4 288 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 FAM160A1Q05DH4 1040 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 RHOXF2Q9BQY4 288 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 CARD6Q9BX69 1037 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
ATPAF1-214ENST00000576409 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 DHX58Q96C10 678 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 ODF2Q5BJF6 829 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 SSH3Q8TE77 659 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 IFNL2Q8IZJ0 200 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 CCDC148Q8NFR7 591 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 FEZ1Q99689 392 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 GNL3LQ9NVN8 582 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 USP5P45974 858 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 ERCC6LQ2NKX8 1250 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 CEP131Q9UPN4 1083 aa20.56■□□□□ 0.88
ATPAF1-214ENST00000576409 KIAA0754O94854 1291 aa20.55■□□□□ 0.88
ATPAF1-214ENST00000576409 KRT28Q7Z3Y7 464 aa20.55■□□□□ 0.88
ATPAF1-214ENST00000576409 ZMYM3Q14202 1370 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 EVCP57679 992 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 USP28Q96RU2 1077 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 VGLL3A8MV65 326 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 NLRP5P59047 1200 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 ZFYVE27Q5T4F4 411 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 MYL10Q9BUA6 226 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 FAM107BQ9H098 131 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 RSPH14Q9UHP6 348 aa20.54■□□□□ 0.88
ATPAF1-214ENST00000576409 CCDC196A0A1B0GTZ2 297 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 SMARCC1Q92922 1105 aaPredicted RBP20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 CT47A1Q5JQC4 288 aaPredicted RBP20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 JADE2Q9NQC1 790 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 RDXP35241 583 aaKnown RBP20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 CUL4AQ13619 759 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 NAA30Q147X3 362 aaPredicted RBP20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 NBPF6Q5VWK0 638 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 GPIHBP1Q8IV16 184 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 NBPF4Q96M43 638 aa20.53■□□□□ 0.88
ATPAF1-214ENST00000576409 TTC21AQ8NDW8 1320 aa20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 STARD3NLO95772 234 aa20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 PPARDQ03181 441 aa20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 C10orf67Q8IYJ2 551 aa20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 CTCFLQ8NI51 663 aaPredicted RBP20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 SRRTQ9BXP5 876 aaKnown RBP20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 XPO4Q9C0E2 1151 aaKnown RBP20.52■□□□□ 0.88
ATPAF1-214ENST00000576409 IDEP14735 1019 aa20.52■□□□□ 0.87
ATPAF1-214ENST00000576409 KCNA6P17658 529 aa20.52■□□□□ 0.87
ATPAF1-214ENST00000576409 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms