RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
RPA1-206ENST00000573994 FZD9O00144 591 aa12.81□□□□□ -0.36
RPA1-206ENST00000573994 BBOX1O75936 387 aa12.81□□□□□ -0.36
RPA1-206ENST00000573994 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
RPA1-206ENST00000573994 NIM1KQ8IY84 436 aa12.81□□□□□ -0.36
RPA1-206ENST00000573994 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
RPA1-206ENST00000573994 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
RPA1-206ENST00000573994 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
RPA1-206ENST00000573994 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
RPA1-206ENST00000573994 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
RPA1-206ENST00000573994 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
RPA1-206ENST00000573994 FLIIQ13045 1269 aa12.8□□□□□ -0.36
RPA1-206ENST00000573994 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
RPA1-206ENST00000573994 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
RPA1-206ENST00000573994 SP8Q8IXZ3 490 aa12.8□□□□□ -0.36
RPA1-206ENST00000573994 CCDC191Q8NCU4 936 aa12.8□□□□□ -0.36
RPA1-206ENST00000573994 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
RPA1-206ENST00000573994 IQCA1LA6NCM1 817 aa12.79□□□□□ -0.36
RPA1-206ENST00000573994 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
RPA1-206ENST00000573994 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
RPA1-206ENST00000573994 MPNDQ8N594 471 aa12.79□□□□□ -0.36
RPA1-206ENST00000573994 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
RPA1-206ENST00000573994 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
RPA1-206ENST00000573994 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
RPA1-206ENST00000573994 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 VAMP4O75379 141 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
RPA1-206ENST00000573994 NEXNQ0ZGT2 675 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 FKBP5Q13451 457 aaPredicted RBP12.78□□□□□ -0.36
RPA1-206ENST00000573994 GPC2Q8N158 579 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
RPA1-206ENST00000573994 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
RPA1-206ENST00000573994 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
RPA1-206ENST00000573994 LRRC37AA6NMS7 1700 aa12.77□□□□□ -0.36
RPA1-206ENST00000573994 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 EPHX2P34913 555 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 GPSM2P81274 684 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 GPR101Q96P66 508 aaPredicted RBP12.77□□□□□ -0.37
RPA1-206ENST00000573994 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
RPA1-206ENST00000573994 TAF1P21675 1872 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 PDE8AO60658 829 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 CTSWP56202 376 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 KIAA2012Q0VF49 1180 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
RPA1-206ENST00000573994 PDAP1Q13442 181 aaKnown RBP12.76□□□□□ -0.37
RPA1-206ENST00000573994 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
RPA1-206ENST00000573994 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
RPA1-206ENST00000573994 F6X3S4 739 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
RPA1-206ENST00000573994 PSEN1P49768 467 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 SCNN1DP51172 638 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
RPA1-206ENST00000573994 LTBP1Q14766 1721 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 DNAAF4Q8WXU2 420 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 VPS33BQ9H267 617 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
RPA1-206ENST00000573994 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 RAD17O75943 681 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 EPS15P42566 896 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 CXCL9Q07325 125 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 GREM2Q9H772 168 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 DBNDD1Q9H9R9 158 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 POLLQ9UGP5 575 aa12.74□□□□□ -0.37
RPA1-206ENST00000573994 YDJCA8MPS7 323 aa12.73□□□□□ -0.37
RPA1-206ENST00000573994 UFL1O94874 794 aa12.73□□□□□ -0.37
RPA1-206ENST00000573994 GMPSP49915 693 aaPredicted RBP12.73□□□□□ -0.37
RPA1-206ENST00000573994 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
RPA1-206ENST00000573994 GCKRQ14397 625 aa12.73□□□□□ -0.37
RPA1-206ENST00000573994 MAP1SQ66K74 1059 aaPredicted RBP12.73□□□□□ -0.37
RPA1-206ENST00000573994 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
RPA1-206ENST00000573994 SCN4AP35499 1836 aa12.73□□□□□ -0.37
RPA1-206ENST00000573994 DOK7Q18PE1 504 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 CIAPIN1Q6FI81 312 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
RPA1-206ENST00000573994 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
RPA1-206ENST00000573994 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 H7C1W4 665 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 ECE2O60344 883 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 CASP7P55210 303 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
RPA1-206ENST00000573994 EYA3Q99504 573 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 GGA1Q9UJY5 639 aa12.71□□□□□ -0.37
RPA1-206ENST00000573994 PASKQ96RG2 1323 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 PCNTO95613 3336 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 E9PSI1 815 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms