RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-214ENST00000573876 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
NPLOC4-214ENST00000573876 PSMD1Q99460 953 aa16.03■□□□□ 0.16
NPLOC4-214ENST00000573876 MINPP1Q9UNW1 487 aa16.03■□□□□ 0.16
NPLOC4-214ENST00000573876 XDHP47989 1333 aa16.02■□□□□ 0.16
NPLOC4-214ENST00000573876 NFKBIEO00221 500 aa16.02■□□□□ 0.16
NPLOC4-214ENST00000573876 RASSF7Q02833 373 aa16.02■□□□□ 0.16
NPLOC4-214ENST00000573876 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
NPLOC4-214ENST00000573876 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 HMMRO75330 724 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 LMNB1P20700 586 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 ATP2B4P23634 1241 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 RFX5P48382 616 aaPredicted RBP16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 GPSM2P81274 684 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 KLHDC4Q8TBB5 520 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 EYA3Q99504 573 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
NPLOC4-214ENST00000573876 MROH5Q6ZUA9 1318 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 EYA2O00167 538 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 UFL1O94874 794 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 KCNJ4P48050 445 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 CHRNDQ07001 517 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 POLA2Q14181 598 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 RWDD1Q9H446 243 aaPredicted RBP16■□□□□ 0.15
NPLOC4-214ENST00000573876 COPRSQ9NQ92 184 aa16■□□□□ 0.15
NPLOC4-214ENST00000573876 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
NPLOC4-214ENST00000573876 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
NPLOC4-214ENST00000573876 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 COL4A1P02462 1669 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 G3BP1Q13283 466 aaKnown RBP eCLIP15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 SLC51AQ86UW1 340 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 SIL1Q9H173 461 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 LEMD3Q9Y2U8 911 aa15.99■□□□□ 0.15
NPLOC4-214ENST00000573876 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 PPIP5K2O43314 1243 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 CIAO1O76071 339 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 IGHDP01880 384 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 IL15P40933 162 aaPredicted RBP15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 LRRC24Q50LG9 513 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 TBC1D16Q8TBP0 767 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 RIPOR2Q9Y4F9 1068 aa15.98■□□□□ 0.15
NPLOC4-214ENST00000573876 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 WASHC4Q2M389 1173 aa15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 ZC3H12CQ9C0D7 883 aaKnown RBP15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 CEP126Q9P2H0 1117 aa15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
NPLOC4-214ENST00000573876 ZNF804BA4D1E1 1349 aa15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 G3V3G9 751 aa15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 TAF5LO75529 589 aa15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
NPLOC4-214ENST00000573876 CHD4Q14839 1912 aa15.96■□□□□ 0.14
NPLOC4-214ENST00000573876 KIAA2012Q0VF49 1180 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 AOC3Q16853 763 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 EXOC6BQ9Y2D4 811 aa15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 NOP58Q9Y2X3 529 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-214ENST00000573876 APBB1O00213 710 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 PDE8BO95263 885 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 UBE4AQ14139 1066 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
NPLOC4-214ENST00000573876 SBF1O95248 1867 aa15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 ERC1Q8IUD2 1116 aa15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 GPR101Q96P66 508 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-214ENST00000573876 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 IFIT1P09914 478 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 PRELPP51888 382 aa15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 B4GALNT3Q6L9W6 998 aa15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 AKAP2Q9Y2D5 859 aa15.92■□□□□ 0.14
NPLOC4-214ENST00000573876 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms