RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
PRPF8-203ENST00000571958 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
PRPF8-203ENST00000571958 EYA3Q99504 573 aa13.05□□□□□ -0.32
PRPF8-203ENST00000571958 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
PRPF8-203ENST00000571958 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-203ENST00000571958 DGKZQ13574 1117 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
PRPF8-203ENST00000571958 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
PRPF8-203ENST00000571958 TNRC18O15417 2968 aaPredicted RBP13.04□□□□□ -0.32
PRPF8-203ENST00000571958 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
PRPF8-203ENST00000571958 SLC34A2O95436 690 aa13.03□□□□□ -0.32
PRPF8-203ENST00000571958 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
PRPF8-203ENST00000571958 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF8-203ENST00000571958 C2orf69Q8N8R5 385 aa13.03□□□□□ -0.32
PRPF8-203ENST00000571958 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
PRPF8-203ENST00000571958 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
PRPF8-203ENST00000571958 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
PRPF8-203ENST00000571958 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
PRPF8-203ENST00000571958 UFL1O94874 794 aa13.02□□□□□ -0.33
PRPF8-203ENST00000571958 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
PRPF8-203ENST00000571958 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
PRPF8-203ENST00000571958 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.33
PRPF8-203ENST00000571958 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
PRPF8-203ENST00000571958 PODXL2Q9NZ53 605 aa13.02□□□□□ -0.33
PRPF8-203ENST00000571958 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
PRPF8-203ENST00000571958 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
PRPF8-203ENST00000571958 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-203ENST00000571958 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-203ENST00000571958 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
PRPF8-203ENST00000571958 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
PRPF8-203ENST00000571958 MYD88Q99836 296 aa13.01□□□□□ -0.33
PRPF8-203ENST00000571958 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
PRPF8-203ENST00000571958 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
PRPF8-203ENST00000571958 ZNF646O15015 1829 aaPredicted RBP13.01□□□□□ -0.33
PRPF8-203ENST00000571958 MYH3P11055 1940 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 ZNF609O15014 1411 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 G3V3G9 751 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
PRPF8-203ENST00000571958 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
PRPF8-203ENST00000571958 CCDC102AQ96A19 550 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 CDCA5Q96FF9 252 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
PRPF8-203ENST00000571958 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 GGA1Q9UJY5 639 aa13□□□□□ -0.33
PRPF8-203ENST00000571958 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
PRPF8-203ENST00000571958 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-203ENST00000571958 TRPA1O75762 1119 aa12.99□□□□□ -0.33
PRPF8-203ENST00000571958 SLC10A3P09131 477 aa12.99□□□□□ -0.33
PRPF8-203ENST00000571958 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
PRPF8-203ENST00000571958 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
PRPF8-203ENST00000571958 RNF186Q9NXI6 227 aa12.99□□□□□ -0.33
PRPF8-203ENST00000571958 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
PRPF8-203ENST00000571958 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
PRPF8-203ENST00000571958 SCARF1Q14162 830 aa12.98□□□□□ -0.33
PRPF8-203ENST00000571958 CCDC152Q4G0S7 254 aa12.98□□□□□ -0.33
PRPF8-203ENST00000571958 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
PRPF8-203ENST00000571958 XDHP47989 1333 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 PDE8AO60658 829 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
PRPF8-203ENST00000571958 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
PRPF8-203ENST00000571958 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
PRPF8-203ENST00000571958 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
PRPF8-203ENST00000571958 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-203ENST00000571958 USP17L8P0C7I0 530 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 C8orf58Q8NAV2 365 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 GMLQ99445 158 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
PRPF8-203ENST00000571958 APAF1O14727 1248 aa12.95□□□□□ -0.34
PRPF8-203ENST00000571958 SOX10P56693 466 aa12.95□□□□□ -0.34
PRPF8-203ENST00000571958 GNAI1P63096 354 aa12.95□□□□□ -0.34
PRPF8-203ENST00000571958 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
PRPF8-203ENST00000571958 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
PRPF8-203ENST00000571958 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 CTSWP56202 376 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 PODNQ7Z5L7 613 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 MAP3K2Q9Y2U5 619 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 PDE4DIPQ5VU43 2346 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
PRPF8-203ENST00000571958 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
PRPF8-203ENST00000571958 FKBP1BP68106 108 aa12.93□□□□□ -0.34
PRPF8-203ENST00000571958 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
PRPF8-203ENST00000571958 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
PRPF8-203ENST00000571958 PRAMEF18Q5VWM3 479 aa12.93□□□□□ -0.34
PRPF8-203ENST00000571958 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
PRPF8-203ENST00000571958 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms