RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 ANKIB1Q9P2G1 1089 aa26.49■■□□□ 1.83
LITAF-205ENST00000570904 ZBTB12Q9Y330 459 aaPredicted RBP26.49■■□□□ 1.83
LITAF-205ENST00000570904 EXOSC9Q06265 439 aaKnown RBP26.48■■□□□ 1.83
LITAF-205ENST00000570904 KCNQ5Q9NR82 932 aa26.48■■□□□ 1.83
LITAF-205ENST00000570904 CNOT7Q9UIV1 285 aaKnown RBP26.48■■□□□ 1.83
LITAF-205ENST00000570904 ABT1Q9ULW3 272 aaKnown RBP26.48■■□□□ 1.83
LITAF-205ENST00000570904 HIRAP54198 1017 aaPredicted RBP26.47■■□□□ 1.83
LITAF-205ENST00000570904 ANKRD18AQ8IVF6 992 aa26.47■■□□□ 1.83
LITAF-205ENST00000570904 MICALL2Q8IY33 904 aa26.47■■□□□ 1.83
LITAF-205ENST00000570904 SPINK5Q9NQ38 1064 aaPredicted RBP26.47■■□□□ 1.83
LITAF-205ENST00000570904 GGA1Q9UJY5 639 aa26.47■■□□□ 1.83
LITAF-205ENST00000570904 RTL9Q8NET4 1388 aa26.46■■□□□ 1.83
LITAF-205ENST00000570904 RASSF10A6NK89 507 aa26.46■■□□□ 1.83
LITAF-205ENST00000570904 VAMP4O75379 141 aa26.46■■□□□ 1.83
LITAF-205ENST00000570904 FKBP5Q13451 457 aaPredicted RBP26.46■■□□□ 1.83
LITAF-205ENST00000570904 DEFB115Q30KQ5 88 aa26.45■■□□□ 1.82
LITAF-205ENST00000570904 UBE3BQ7Z3V4 1068 aa26.45■■□□□ 1.82
LITAF-205ENST00000570904 TTLL11Q8NHH1 800 aa26.45■■□□□ 1.82
LITAF-205ENST00000570904 GLIS2Q9BZE0 524 aaPredicted RBP26.45■■□□□ 1.82
LITAF-205ENST00000570904 ZC3H12CQ9C0D7 883 aaKnown RBP26.45■■□□□ 1.82
LITAF-205ENST00000570904 GREM2Q9H772 168 aa26.45■■□□□ 1.82
LITAF-205ENST00000570904 H7C1D1 291 aa26.44■■□□□ 1.82
LITAF-205ENST00000570904 CDC5LQ99459 802 aaKnown RBP26.44■■□□□ 1.82
LITAF-205ENST00000570904 H7C1W4 665 aa26.43■■□□□ 1.82
LITAF-205ENST00000570904 CST9Q5W186 159 aa26.43■■□□□ 1.82
LITAF-205ENST00000570904 DNAAF4Q8WXU2 420 aa26.43■■□□□ 1.82
LITAF-205ENST00000570904 DPF2Q92785 391 aa26.43■■□□□ 1.82
LITAF-205ENST00000570904 XDHP47989 1333 aa26.42■■□□□ 1.82
LITAF-205ENST00000570904 GCKRQ14397 625 aa26.42■■□□□ 1.82
LITAF-205ENST00000570904 SAMD7Q7Z3H4 446 aa26.42■■□□□ 1.82
LITAF-205ENST00000570904 PGAP2Q9UHJ9 254 aa26.42■■□□□ 1.82
LITAF-205ENST00000570904 G3V3G9 751 aa26.41■■□□□ 1.82
LITAF-205ENST00000570904 DCAF8Q5TAQ9 597 aa26.41■■□□□ 1.82
LITAF-205ENST00000570904 MYH3P11055 1940 aa26.41■■□□□ 1.82
LITAF-205ENST00000570904 TRPM7Q96QT4 1865 aa26.4■■□□□ 1.82
LITAF-205ENST00000570904 SCN9AQ15858 1988 aa26.4■■□□□ 1.82
LITAF-205ENST00000570904 TBC1D10BQ4KMP7 808 aaPredicted RBP26.4■■□□□ 1.82
LITAF-205ENST00000570904 ZC3H15Q8WU90 426 aaKnown RBP26.4■■□□□ 1.82
LITAF-205ENST00000570904 WDR33Q9C0J8 1336 aaKnown RBP26.39■■□□□ 1.82
LITAF-205ENST00000570904 FOXN1O15353 648 aa26.39■■□□□ 1.82
LITAF-205ENST00000570904 CELF2O95319 508 aaKnown RBP26.39■■□□□ 1.82
LITAF-205ENST00000570904 EGFRP00533 1210 aa26.39■■□□□ 1.82
LITAF-205ENST00000570904 RPS12P25398 132 aaKnown RBP26.39■■□□□ 1.82
LITAF-205ENST00000570904 PAXIP1Q6ZW49 1069 aaPredicted RBP26.39■■□□□ 1.82
LITAF-205ENST00000570904 MYH16Q9H6N6 1097 aa26.39■■□□□ 1.82
LITAF-205ENST00000570904 SPEF2Q9C093 1822 aa26.39■■□□□ 1.81
LITAF-205ENST00000570904 WTIPA6NIX2 430 aaPredicted RBP26.38■■□□□ 1.81
LITAF-205ENST00000570904 ATP2B4P23634 1241 aa26.38■■□□□ 1.81
LITAF-205ENST00000570904 CASP7P55210 303 aa26.38■■□□□ 1.81
LITAF-205ENST00000570904 TNS4Q8IZW8 715 aa26.38■■□□□ 1.81
LITAF-205ENST00000570904 LINS1Q8NG48 757 aa26.38■■□□□ 1.81
LITAF-205ENST00000570904 BSDC1Q9NW68 430 aaPredicted RBP26.38■■□□□ 1.81
LITAF-205ENST00000570904 VIL1P09327 827 aaKnown RBP26.37■■□□□ 1.81
LITAF-205ENST00000570904 PLA2G12BQ9BX93 195 aa26.37■■□□□ 1.81
LITAF-205ENST00000570904 MINPP1Q9UNW1 487 aa26.37■■□□□ 1.81
LITAF-205ENST00000570904 TLL2Q9Y6L7 1015 aa26.37■■□□□ 1.81
LITAF-205ENST00000570904 F6X3S4 739 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 GRM1Q13255 1194 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 FAM161AQ3B820 660 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 RBM26Q5T8P6 1007 aaKnown RBP26.36■■□□□ 1.81
LITAF-205ENST00000570904 CYP4F22Q6NT55 531 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 AIDAQ96BJ3 306 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 CAPNS2Q96L46 248 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 ZNF408Q9H9D4 720 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 CACNA1FO60840 1977 aa26.36■■□□□ 1.81
LITAF-205ENST00000570904 CDC37L1Q7L3B6 337 aa26.35■■□□□ 1.81
LITAF-205ENST00000570904 USP48Q86UV5 1035 aa26.35■■□□□ 1.81
LITAF-205ENST00000570904 WBP1LQ9NX94 342 aa26.35■■□□□ 1.81
LITAF-205ENST00000570904 ITGA6P23229 1130 aa26.34■■□□□ 1.81
LITAF-205ENST00000570904 IGHMBP2P38935 993 aaKnown RBP26.34■■□□□ 1.81
LITAF-205ENST00000570904 DLK2Q6UY11 383 aa26.34■■□□□ 1.81
LITAF-205ENST00000570904 MED23Q9ULK4 1368 aa26.33■■□□□ 1.8
LITAF-205ENST00000570904 CCT4P50991 539 aaKnown RBP26.32■■□□□ 1.8
LITAF-205ENST00000570904 KIF4BQ2VIQ3 1234 aa26.32■■□□□ 1.8
LITAF-205ENST00000570904 BEND3Q5T5X7 828 aa26.32■■□□□ 1.8
LITAF-205ENST00000570904 RSBN1LQ6PCB5 846 aaPredicted RBP26.32■■□□□ 1.8
LITAF-205ENST00000570904 CSF1RP07333 972 aa26.31■■□□□ 1.8
LITAF-205ENST00000570904 ECE1P42892 770 aa26.31■■□□□ 1.8
LITAF-205ENST00000570904 CTCFP49711 727 aaPredicted RBP26.31■■□□□ 1.8
LITAF-205ENST00000570904 SAPCD2Q86UD0 394 aa26.31■■□□□ 1.8
LITAF-205ENST00000570904 ZNF521Q96K83 1311 aa26.31■■□□□ 1.8
LITAF-205ENST00000570904 THSD7BQ9C0I4 1608 aa26.31■■□□□ 1.8
LITAF-205ENST00000570904 KRT26Q7Z3Y9 468 aa26.3■■□□□ 1.8
LITAF-205ENST00000570904 ZNF609O15014 1411 aa26.3■■□□□ 1.8
LITAF-205ENST00000570904 ADM5C9JUS6 153 aa26.29■■□□□ 1.8
LITAF-205ENST00000570904 PODNQ7Z5L7 613 aa26.29■■□□□ 1.8
LITAF-205ENST00000570904 AGBL3Q8NEM8 1001 aa26.29■■□□□ 1.8
LITAF-205ENST00000570904 MPHOSPH8Q99549 860 aa26.29■■□□□ 1.8
LITAF-205ENST00000570904 PSME4Q14997 1843 aa26.29■■□□□ 1.8
LITAF-205ENST00000570904 ASTN2O75129 1339 aaPredicted RBP26.29■■□□□ 1.8
LITAF-205ENST00000570904 USP17L3A6NCW0 530 aa26.28■■□□□ 1.8
LITAF-205ENST00000570904 USP17L4A6NCW7 530 aa26.28■■□□□ 1.8
LITAF-205ENST00000570904 MAP2K1Q02750 393 aaPredicted RBP26.28■■□□□ 1.8
LITAF-205ENST00000570904 USP17L1Q7RTZ2 530 aa26.28■■□□□ 1.8
LITAF-205ENST00000570904 DCPSQ96C86 337 aaKnown RBP26.28■■□□□ 1.8
LITAF-205ENST00000570904 GGA3Q9NZ52 723 aa26.28■■□□□ 1.8
LITAF-205ENST00000570904 AOC2O75106 756 aa26.27■■□□□ 1.8
LITAF-205ENST00000570904 CAPN15O75808 1086 aa26.27■■□□□ 1.8
LITAF-205ENST00000570904 ZNF280AP59817 542 aaPredicted RBP26.27■■□□□ 1.8
LITAF-205ENST00000570904 TXNRD3Q86VQ6 643 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms