RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
TCF4-243ENST00000569357 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
TCF4-243ENST00000569357 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
TCF4-243ENST00000569357 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
TCF4-243ENST00000569357 SIPA1L3O60292 1781 aaPredicted RBP12.12□□□□□ -0.47
TCF4-243ENST00000569357 FKTNO75072 461 aa12.11□□□□□ -0.47
TCF4-243ENST00000569357 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
TCF4-243ENST00000569357 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
TCF4-243ENST00000569357 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
TCF4-243ENST00000569357 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
TCF4-243ENST00000569357 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
TCF4-243ENST00000569357 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■■■■ 31.9
TCF4-243ENST00000569357 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
TCF4-243ENST00000569357 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
TCF4-243ENST00000569357 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
TCF4-243ENST00000569357 UTP14AQ9BVJ6 771 aaKnown RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
TCF4-243ENST00000569357 UBE2Q2LH0YL09 131 aa12.09□□□□□ -0.47
TCF4-243ENST00000569357 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
TCF4-243ENST00000569357 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
TCF4-243ENST00000569357 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
TCF4-243ENST00000569357 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
TCF4-243ENST00000569357 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
TCF4-243ENST00000569357 NSFL1CQ9UNZ2 370 aaKnown RBP12.09□□□□□ -0.47
TCF4-243ENST00000569357 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
TCF4-243ENST00000569357 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
TCF4-243ENST00000569357 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
TCF4-243ENST00000569357 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
TCF4-243ENST00000569357 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
TCF4-243ENST00000569357 SLC17A8Q8NDX2 589 aa12.08□□□□□ -0.48
TCF4-243ENST00000569357 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
TCF4-243ENST00000569357 ECE2O60344 883 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
TCF4-243ENST00000569357 FKBP1BP68106 108 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 GRAPQ13588 217 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 SCARF1Q14162 830 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
TCF4-243ENST00000569357 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
TCF4-243ENST00000569357 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
TCF4-243ENST00000569357 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
TCF4-243ENST00000569357 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
TCF4-243ENST00000569357 G3V3G9 751 aa12.06□□□□□ -0.48
TCF4-243ENST00000569357 TM4SF4P48230 202 aa12.06□□□□□ -0.48
TCF4-243ENST00000569357 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
TCF4-243ENST00000569357 PRAMEF18Q5VWM3 479 aa12.06□□□□□ -0.48
TCF4-243ENST00000569357 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
TCF4-243ENST00000569357 SREBF2Q12772 1141 aa12.05□□□□□ -0.48
TCF4-243ENST00000569357 NOM1Q5C9Z4 860 aaKnown RBP12.05□□□□□ -0.48
TCF4-243ENST00000569357 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
TCF4-243ENST00000569357 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
TCF4-243ENST00000569357 POLR2AP24928 1970 aaKnown RBP12.05□□□□□ -0.48
TCF4-243ENST00000569357 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
TCF4-243ENST00000569357 NUP98P52948 1817 aa12.04□□□□□ -0.48
TCF4-243ENST00000569357 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
TCF4-243ENST00000569357 TMEM106CQ9BVX2 250 aa12.04□□□□□ -0.48
TCF4-243ENST00000569357 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
TCF4-243ENST00000569357 PRKG1Q13976 671 aa12.03□□□□□ -0.48
TCF4-243ENST00000569357 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
TCF4-243ENST00000569357 TMC4Q7Z404 712 aa12.03□□□□□ -0.48
TCF4-243ENST00000569357 EYA3Q99504 573 aa12.03□□□□□ -0.48
TCF4-243ENST00000569357 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
TCF4-243ENST00000569357 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
TCF4-243ENST00000569357 GPSM2P81274 684 aa12.02□□□□□ -0.49
TCF4-243ENST00000569357 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
TCF4-243ENST00000569357 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
TCF4-243ENST00000569357 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.49
TCF4-243ENST00000569357 PAPPA2Q9BXP8 1791 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 H0YGN5 161 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 MAP3K13O43283 966 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
TCF4-243ENST00000569357 NF2P35240 595 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 EIF4A1P60842 406 aaKnown RBP12.01□□□□□ -0.49
TCF4-243ENST00000569357 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 CELF1Q92879 486 aaKnown RBP12.01□□□□□ -0.49
TCF4-243ENST00000569357 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 PTPN22Q9Y2R2 807 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 SH3TC1Q8TE82 1336 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 DUOX1Q9NRD9 1551 aa12.01□□□□□ -0.49
TCF4-243ENST00000569357 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
TCF4-243ENST00000569357 ALDH1A1P00352 501 aa12□□□□□ -0.49
TCF4-243ENST00000569357 MYCP01106 439 aaPredicted RBP12□□□□□ -0.49
TCF4-243ENST00000569357 ANXA1P04083 346 aa12□□□□□ -0.49
TCF4-243ENST00000569357 USP17L8P0C7I0 530 aa12□□□□□ -0.49
TCF4-243ENST00000569357 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
TCF4-243ENST00000569357 PTPN12Q05209 780 aaKnown RBP12□□□□□ -0.49
TCF4-243ENST00000569357 AIMP1Q12904 312 aaKnown RBP12□□□□□ -0.49
TCF4-243ENST00000569357 NLRP10Q86W26 655 aa12□□□□□ -0.49
TCF4-243ENST00000569357 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
TCF4-243ENST00000569357 MYOZ2Q9NPC6 264 aa12□□□□□ -0.49
TCF4-243ENST00000569357 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
TCF4-243ENST00000569357 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
TCF4-243ENST00000569357 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
TCF4-243ENST00000569357 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
TCF4-243ENST00000569357 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms