RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
GGA2-210ENST00000567339 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
GGA2-210ENST00000567339 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
GGA2-210ENST00000567339 SRGAP3O43295 1099 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 CIAO1O76071 339 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 RASSF7Q02833 373 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 COPRSQ9NQ92 184 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
GGA2-210ENST00000567339 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
GGA2-210ENST00000567339 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
GGA2-210ENST00000567339 GPSM2P81274 684 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
GGA2-210ENST00000567339 CHRNDQ07001 517 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
GGA2-210ENST00000567339 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 CHD4Q14839 1912 aa12.28□□□□□ -0.44
GGA2-210ENST00000567339 COL4A1P02462 1669 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 EYA2O00167 538 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 HMMRO75330 724 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 UFL1O94874 794 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 TBC1D16Q8TBP0 767 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.45
GGA2-210ENST00000567339 RIPOR2Q9Y4F9 1068 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 LTBP1Q14766 1721 aa12.27□□□□□ -0.45
GGA2-210ENST00000567339 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 TAF1P21675 1872 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 IL15P40933 162 aaPredicted RBP12.26□□□□□ -0.45
GGA2-210ENST00000567339 KCNJ4P48050 445 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 POLA2Q14181 598 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 LARGE2Q8N3Y3 721 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 ZNF594Q96JF6 807 aaPredicted RBP12.26□□□□□ -0.45
GGA2-210ENST00000567339 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
GGA2-210ENST00000567339 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
GGA2-210ENST00000567339 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
GGA2-210ENST00000567339 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
GGA2-210ENST00000567339 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
GGA2-210ENST00000567339 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
GGA2-210ENST00000567339 PNMA6EA0A0J9YXQ4 647 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 SBF1O95248 1867 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 PDE8BO95263 885 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
GGA2-210ENST00000567339 AOC3Q16853 763 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
GGA2-210ENST00000567339 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
GGA2-210ENST00000567339 G3V3G9 751 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 FZD9O00144 591 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 YY1P25490 414 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 PRELPP51888 382 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
GGA2-210ENST00000567339 G3BP1Q13283 466 aaKnown RBP eCLIP12.23□□□□□ -0.45
GGA2-210ENST00000567339 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 ERC1Q8IUD2 1116 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 VGLL2Q8N8G2 317 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
GGA2-210ENST00000567339 ZNRF3Q9ULT6 936 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
GGA2-210ENST00000567339 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
GGA2-210ENST00000567339 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
GGA2-210ENST00000567339 PODNQ7Z5L7 613 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 COA1Q9GZY4 146 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 SIL1Q9H173 461 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
GGA2-210ENST00000567339 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
GGA2-210ENST00000567339 TIAM2Q8IVF5 1701 aa12.21□□□□□ -0.45
GGA2-210ENST00000567339 TAF5LO75529 589 aa12.21□□□□□ -0.45
GGA2-210ENST00000567339 SURF6O75683 361 aaKnown RBP12.21□□□□□ -0.45
GGA2-210ENST00000567339 SLC5A1P13866 664 aa12.21□□□□□ -0.45
GGA2-210ENST00000567339 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.45
GGA2-210ENST00000567339 ZNF804AQ7Z570 1209 aa12.21□□□□□ -0.45
GGA2-210ENST00000567339 LPIN2Q92539 896 aa12.21□□□□□ -0.45
GGA2-210ENST00000567339 GLTPD2A6NH11 291 aa12.2□□□□□ -0.46
GGA2-210ENST00000567339 ECE2O60344 883 aa12.2□□□□□ -0.46
GGA2-210ENST00000567339 FGFR2P21802 821 aa12.2□□□□□ -0.46
GGA2-210ENST00000567339 TNIP1Q15025 636 aa12.2□□□□□ -0.46
GGA2-210ENST00000567339 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms