RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 JARID2Q92833 1246 aaPredicted RBP8.57□□□□□ -1.04
SMG1-210ENST00000565224 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
SMG1-210ENST00000565224 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
SMG1-210ENST00000565224 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
SMG1-210ENST00000565224 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 TDRD7Q8NHU6 1098 aaKnown RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 PGBD1Q96JS3 809 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 LLPHQ9BRT6 129 aaKnown RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 CFAP45Q9UL16 551 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 NDUFB9Q9Y6M9 179 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 SH3TC1Q8TE82 1336 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 MEGF6O75095 1541 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 A0A087WZG4 1122 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 UBAP1LF5GYI3 381 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 NR1I2O75469 434 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 CAVIN2O95810 425 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 PTGS1P23219 599 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 FGD1P98174 961 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 DDX46Q7L014 1031 aaKnown RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 KBTBD3Q8NAB2 608 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
SMG1-210ENST00000565224 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
SMG1-210ENST00000565224 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 C1orf167Q5SNV9 1468 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PFKFB2O60825 505 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 CHGBP05060 677 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PIP4K2AP48426 406 aaPredicted RBP8.55□□□□□ -1.04
SMG1-210ENST00000565224 ZNF75DP51815 510 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 CASP7P55210 303 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 SCRN1Q12765 414 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PLA2G4DQ86XP0 818 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 DDX11Q96FC9 970 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 ABCC6O95255 1503 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 KIF1AQ12756 1690 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PALLDQ8WX93 1383 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
SMG1-210ENST00000565224 ZNF165P49910 485 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 NAA16Q6N069 864 aaPredicted RBP8.55□□□□□ -1.04
SMG1-210ENST00000565224 STOX1Q6ZVD7 989 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
SMG1-210ENST00000565224 DRC7Q8IY82 874 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 TSC1Q92574 1164 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 TRIM5Q9C035 493 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 HELLSQ9NRZ9 838 aa8.55□□□□□ -1.04
SMG1-210ENST00000565224 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 LMBR1LQ6UX01 489 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 CCDC186Q7Z3E2 898 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 NSUN7Q8NE18 718 aaKnown RBP8.54□□□□□ -1.04
SMG1-210ENST00000565224 FBXO41Q8TF61 875 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 DSCC1Q9BVC3 393 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
SMG1-210ENST00000565224 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 CTAGE5O15320 804 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 CYP27B1O15528 508 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 GPR108Q9NPR9 543 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 PAG1Q9NWQ8 432 aa8.54□□□□□ -1.04
SMG1-210ENST00000565224 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 GOLIM4O00461 696 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 CDC25BP30305 580 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ADD1P35611 737 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 FOXO4P98177 505 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ARID3AQ99856 593 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 C19orf44Q9H6X5 657 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 RCOR1Q9UKL0 485 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 EP400Q96L91 3159 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 H7C1W4 665 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 CTDNEP1O95476 244 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 IL15P40933 162 aaPredicted RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 CABP4P57796 275 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 EXOSC10Q01780 885 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 CEBPZQ03701 1054 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 APOBRQ0VD83 1088 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ZMYM1Q5SVZ6 1142 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ATL3Q6DD88 541 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ZSCAN25Q6NSZ9 544 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 ATG9AQ7Z3C6 839 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 ZNF396Q96N95 335 aaPredicted RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 NEUROD6Q96NK8 337 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 AGXT2Q9BYV1 514 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
SMG1-210ENST00000565224 CCDC9Q9Y3X0 531 aaKnown RBP8.53□□□□□ -1.04
SMG1-210ENST00000565224 ALS2Q96Q42 1657 aa8.52□□□□□ -1.04
SMG1-210ENST00000565224 ARFGEF2Q9Y6D5 1785 aa8.52□□□□□ -1.05
SMG1-210ENST00000565224 LRMPQ12912 555 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms