RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ECE2O60344 883 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 CTSWP56202 376 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 MICALL2Q8IY33 904 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 TNS4Q8IZW8 715 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 PRDM10Q9NQV6 1147 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 ABT1Q9ULW3 272 aaKnown RBP21.48■■□□□ 1.03
CCNF-203ENST00000564236 FANCIQ9NVI1 1328 aa21.48■■□□□ 1.03
CCNF-203ENST00000564236 RIMBP2O15034 1052 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 G2E3Q7L622 706 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 TTLL11Q8NHH1 800 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 HHIPL1Q96JK4 782 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 ZC3H12CQ9C0D7 883 aaKnown RBP21.47■■□□□ 1.03
CCNF-203ENST00000564236 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
CCNF-203ENST00000564236 ZBTB12Q9Y330 459 aaPredicted RBP21.47■■□□□ 1.03
CCNF-203ENST00000564236 H7C1W4 665 aa21.46■■□□□ 1.03
CCNF-203ENST00000564236 VIL1P09327 827 aaKnown RBP21.46■■□□□ 1.03
CCNF-203ENST00000564236 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
CCNF-203ENST00000564236 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
CCNF-203ENST00000564236 JARID2Q92833 1246 aaPredicted RBP21.46■■□□□ 1.03
CCNF-203ENST00000564236 CDC5LQ99459 802 aaKnown RBP21.46■■□□□ 1.03
CCNF-203ENST00000564236 PLA2G12BQ9BX93 195 aa21.46■■□□□ 1.03
CCNF-203ENST00000564236 XDHP47989 1333 aa21.46■■□□□ 1.03
CCNF-203ENST00000564236 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 UFL1O94874 794 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 ECE1P42892 770 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 CTCFP49711 727 aaPredicted RBP21.45■■□□□ 1.02
CCNF-203ENST00000564236 MAP2K1Q02750 393 aaPredicted RBP21.45■■□□□ 1.02
CCNF-203ENST00000564236 FLIIQ13045 1269 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 SAPCD2Q86UD0 394 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 GLIS2Q9BZE0 524 aaPredicted RBP21.45■■□□□ 1.02
CCNF-203ENST00000564236 BSDC1Q9NW68 430 aaPredicted RBP21.45■■□□□ 1.02
CCNF-203ENST00000564236 ANKIB1Q9P2G1 1089 aa21.45■■□□□ 1.02
CCNF-203ENST00000564236 TRPM7Q96QT4 1865 aa21.44■■□□□ 1.02
CCNF-203ENST00000564236 VAMP4O75379 141 aa21.44■■□□□ 1.02
CCNF-203ENST00000564236 DOK7Q18PE1 504 aa21.44■■□□□ 1.02
CCNF-203ENST00000564236 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
CCNF-203ENST00000564236 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
CCNF-203ENST00000564236 GPR101Q96P66 508 aaPredicted RBP21.44■■□□□ 1.02
CCNF-203ENST00000564236 KCNQ5Q9NR82 932 aa21.44■■□□□ 1.02
CCNF-203ENST00000564236 ATP2B4P23634 1241 aa21.43■■□□□ 1.02
CCNF-203ENST00000564236 CASP7P55210 303 aa21.43■■□□□ 1.02
CCNF-203ENST00000564236 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
CCNF-203ENST00000564236 CELF2O95319 508 aaKnown RBP21.42■■□□□ 1.02
CCNF-203ENST00000564236 GCKRQ14397 625 aa21.42■■□□□ 1.02
CCNF-203ENST00000564236 SAMD7Q7Z3H4 446 aa21.42■■□□□ 1.02
CCNF-203ENST00000564236 GREM2Q9H772 168 aa21.42■■□□□ 1.02
CCNF-203ENST00000564236 MED23Q9ULK4 1368 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 EGFRP00533 1210 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 MAP2K2P36507 400 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 PODNQ7Z5L7 613 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 AGBL3Q8NEM8 1001 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 CCDC85AQ96PX6 553 aaPredicted RBP21.41■■□□□ 1.02
CCNF-203ENST00000564236 MINPP1Q9UNW1 487 aa21.41■■□□□ 1.02
CCNF-203ENST00000564236 CSF1RP07333 972 aa21.4■■□□□ 1.02
CCNF-203ENST00000564236 ZNF280AP59817 542 aaPredicted RBP21.4■■□□□ 1.02
CCNF-203ENST00000564236 UBE3BQ7Z3V4 1068 aa21.4■■□□□ 1.02
CCNF-203ENST00000564236 GMLQ99445 158 aa21.4■■□□□ 1.02
CCNF-203ENST00000564236 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
CCNF-203ENST00000564236 SCN9AQ15858 1988 aa21.39■■□□□ 1.02
CCNF-203ENST00000564236 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.01
CCNF-203ENST00000564236 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
CCNF-203ENST00000564236 RSBN1LQ6PCB5 846 aaPredicted RBP21.39■■□□□ 1.01
CCNF-203ENST00000564236 HSPA8P11142 646 aaKnown RBP21.38■■□□□ 1.01
CCNF-203ENST00000564236 EXOSC9Q06265 439 aaKnown RBP21.38■■□□□ 1.01
CCNF-203ENST00000564236 FKBP5Q13451 457 aaPredicted RBP21.38■■□□□ 1.01
CCNF-203ENST00000564236 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
CCNF-203ENST00000564236 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
CCNF-203ENST00000564236 USP48Q86UV5 1035 aa21.37■■□□□ 1.01
CCNF-203ENST00000564236 MYH3P11055 1940 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 G3V3G9 751 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 CCT4P50991 539 aaKnown RBP21.36■■□□□ 1.01
CCNF-203ENST00000564236 DCAF8Q5TAQ9 597 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 KRT26Q7Z3Y9 468 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 LEMD3Q9Y2U8 911 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 PSME4Q14997 1843 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 CACNA1FO60840 1977 aa21.36■■□□□ 1.01
CCNF-203ENST00000564236 USP17L3A6NCW0 530 aa21.35■■□□□ 1.01
CCNF-203ENST00000564236 USP17L4A6NCW7 530 aa21.35■■□□□ 1.01
CCNF-203ENST00000564236 ITGA6P23229 1130 aa21.35■■□□□ 1.01
CCNF-203ENST00000564236 LBX1P52954 281 aa21.35■■□□□ 1.01
CCNF-203ENST00000564236 USP17L1Q7RTZ2 530 aa21.35■■□□□ 1.01
CCNF-203ENST00000564236 ZNF521Q96K83 1311 aa21.34■■□□□ 1.01
CCNF-203ENST00000564236 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
CCNF-203ENST00000564236 IGHMBP2P38935 993 aaKnown RBP21.34■■□□□ 1.01
CCNF-203ENST00000564236 BEND3Q5T5X7 828 aa21.34■■□□□ 1.01
CCNF-203ENST00000564236 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
CCNF-203ENST00000564236 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
CCNF-203ENST00000564236 FAM161AQ3B820 660 aa21.33■■□□□ 1.01
CCNF-203ENST00000564236 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1.01
CCNF-203ENST00000564236 ANKRD2Q9GZV1 360 aa21.33■■□□□ 1.01
CCNF-203ENST00000564236 COA1Q9GZY4 146 aa21.33■■□□□ 1.01
CCNF-203ENST00000564236 PITPNM2Q9BZ72 1349 aa21.32■■□□□ 1
CCNF-203ENST00000564236 CA12O43570 354 aa21.32■■□□□ 1
CCNF-203ENST00000564236 USP17L8P0C7I0 530 aa21.32■■□□□ 1
CCNF-203ENST00000564236 MMP14P50281 582 aa21.32■■□□□ 1
CCNF-203ENST00000564236 ZNF408Q9H9D4 720 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms