RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
SPG7-209ENST00000564047 SIL1Q9H173 461 aa15.95■□□□□ 0.14
SPG7-209ENST00000564047 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 RHPN1Q8TCX5 695 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 NMRK2Q9NPI5 230 aa15.94■□□□□ 0.14
SPG7-209ENST00000564047 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
SPG7-209ENST00000564047 APBB1O00213 710 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 SASH1O94885 1247 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 SRGNP10124 158 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 NPR1P16066 1061 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
SPG7-209ENST00000564047 GRAPQ13588 217 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
SPG7-209ENST00000564047 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 MPHOSPH8Q99549 860 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 PUS3Q9BZE2 481 aaKnown RBP15.93■□□□□ 0.14
SPG7-209ENST00000564047 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
SPG7-209ENST00000564047 KIF13BQ9NQT8 1826 aa15.92■□□□□ 0.14
SPG7-209ENST00000564047 FSTL1Q12841 308 aa15.92■□□□□ 0.14
SPG7-209ENST00000564047 CELF1Q92879 486 aaKnown RBP15.92■□□□□ 0.14
SPG7-209ENST00000564047 CNNM1Q9NRU3 951 aa15.92■□□□□ 0.14
SPG7-209ENST00000564047 BSDC1Q9NW68 430 aaPredicted RBP15.92■□□□□ 0.14
SPG7-209ENST00000564047 BCS1LQ9Y276 419 aa15.92■□□□□ 0.14
SPG7-209ENST00000564047 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 H0YIN7 160 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 HTRA3P83110 453 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 MROH5Q6ZUA9 1318 aa15.91■□□□□ 0.14
SPG7-209ENST00000564047 SMARCA5O60264 1052 aaPredicted RBP15.9■□□□□ 0.14
SPG7-209ENST00000564047 BBOX1O75936 387 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 ALDH1B1P30837 517 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 TGFB2P61812 414 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 TFCP2Q12800 502 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 CLASRPQ8N2M8 674 aaKnown RBP15.9■□□□□ 0.14
SPG7-209ENST00000564047 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 CEP126Q9P2H0 1117 aa15.9■□□□□ 0.14
SPG7-209ENST00000564047 METTL24Q5JXM2 366 aa15.89■□□□□ 0.13
SPG7-209ENST00000564047 TMC4Q7Z404 712 aa15.89■□□□□ 0.13
SPG7-209ENST00000564047 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
SPG7-209ENST00000564047 COL4A1P02462 1669 aa15.88■□□□□ 0.13
SPG7-209ENST00000564047 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
SPG7-209ENST00000564047 PDE8BO95263 885 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 PDE4AP27815 886 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 CHRNA5P30532 468 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 TNNI3KQ59H18 835 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 VGLL2Q8N8G2 317 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 CNKSR1Q969H4 720 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 ZNF622Q969S3 477 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■■□□ 15.6
SPG7-209ENST00000564047 ANKRD2Q9GZV1 360 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 MINPP1Q9UNW1 487 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.87■□□□□ 0.13
SPG7-209ENST00000564047 FPGT-TNNI3KV9GXZ4 949 aa15.87■□□□□ 0.13
SPG7-209ENST00000564047 CHRNDQ07001 517 aa15.86■□□□□ 0.13
SPG7-209ENST00000564047 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
SPG7-209ENST00000564047 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
SPG7-209ENST00000564047 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
SPG7-209ENST00000564047 ARFGEF1Q9Y6D6 1849 aa15.85■□□□□ 0.13
SPG7-209ENST00000564047 A0A0G2JLW4 131 aa15.85■□□□□ 0.13
SPG7-209ENST00000564047 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
SPG7-209ENST00000564047 IFIT2P09913 472 aaKnown RBP15.85■□□□□ 0.13
SPG7-209ENST00000564047 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
SPG7-209ENST00000564047 AACSQ86V21 672 aa15.85■□□□□ 0.13
SPG7-209ENST00000564047 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
SPG7-209ENST00000564047 DPEP1P16444 411 aa15.84■□□□□ 0.13
SPG7-209ENST00000564047 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
SPG7-209ENST00000564047 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
SPG7-209ENST00000564047 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
SPG7-209ENST00000564047 ATP6V0A2Q9Y487 856 aa15.84■□□□□ 0.13
SPG7-209ENST00000564047 RBM19Q9Y4C8 960 aaKnown RBP15.84■□□□□ 0.13
SPG7-209ENST00000564047 SALL3Q9BXA9 1300 aa15.84■□□□□ 0.13
SPG7-209ENST00000564047 ZNF609O15014 1411 aa15.84■□□□□ 0.13
SPG7-209ENST00000564047 A0A1B0GUL7 405 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 TAF5LO75529 589 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 FGFR2P21802 821 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 KCNA3P22001 575 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 RGS3P49796 1198 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 ATP2B3Q16720 1220 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
SPG7-209ENST00000564047 PLEKHM2Q8IWE5 1019 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.12
SPG7-209ENST00000564047 LPIN2Q92539 896 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 CCDC8Q9H0W5 538 aaPredicted RBP15.83■□□□□ 0.12
SPG7-209ENST00000564047 BCL11AQ9H165 835 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 OSBPL3Q9H4L5 887 aa15.83■□□□□ 0.12
SPG7-209ENST00000564047 MX1P20591 662 aa15.82■□□□□ 0.12
SPG7-209ENST00000564047 TIMM10P62072 90 aa15.82■□□□□ 0.12
SPG7-209ENST00000564047 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
SPG7-209ENST00000564047 TTLL6Q8N841 843 aa15.82■□□□□ 0.12
SPG7-209ENST00000564047 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
SPG7-209ENST00000564047 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 356.9 ms