RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TSKSQ9UJT2 592 aa27■■□□□ 1.91
HERC2-204ENST00000563945 DDX60Q8IY21 1712 aaKnown RBP26.99■■□□□ 1.91
HERC2-204ENST00000563945 APAF1O14727 1248 aa26.99■■□□□ 1.91
HERC2-204ENST00000563945 HUNKP57058 714 aa26.99■■□□□ 1.91
HERC2-204ENST00000563945 CCDC152Q4G0S7 254 aa26.99■■□□□ 1.91
HERC2-204ENST00000563945 KRT26Q7Z3Y9 468 aa26.99■■□□□ 1.91
HERC2-204ENST00000563945 PHAXQ9H814 394 aaKnown RBP26.99■■□□□ 1.91
HERC2-204ENST00000563945 DDX58O95786 925 aaKnown RBP26.98■■□□□ 1.91
HERC2-204ENST00000563945 ZNF853P0CG23 659 aa26.98■■□□□ 1.91
HERC2-204ENST00000563945 BRPF1P55201 1214 aaPredicted RBP26.98■■□□□ 1.91
HERC2-204ENST00000563945 CCDC191Q8NCU4 936 aa26.98■■□□□ 1.91
HERC2-204ENST00000563945 DUOX1Q9NRD9 1551 aa26.97■■□□□ 1.91
HERC2-204ENST00000563945 NOGQ13253 232 aa26.97■■□□□ 1.91
HERC2-204ENST00000563945 C2orf69Q8N8R5 385 aa26.97■■□□□ 1.91
HERC2-204ENST00000563945 GGA1Q9UJY5 639 aa26.97■■□□□ 1.91
HERC2-204ENST00000563945 LRRC37AA6NMS7 1700 aa26.96■■□□□ 1.91
HERC2-204ENST00000563945 CCDC85CA6NKD9 419 aa26.96■■□□□ 1.91
HERC2-204ENST00000563945 UFL1O94874 794 aa26.96■■□□□ 1.91
HERC2-204ENST00000563945 PRKRIP1Q9H875 184 aaPredicted RBP26.96■■□□□ 1.91
HERC2-204ENST00000563945 SEC31BQ9NQW1 1179 aa26.96■■□□□ 1.91
HERC2-204ENST00000563945 CWC25Q9NXE8 425 aaPredicted RBP26.96■■□□□ 1.91
HERC2-204ENST00000563945 THSD7BQ9C0I4 1608 aa26.96■■□□□ 1.91
HERC2-204ENST00000563945 PDE8AO60658 829 aa26.95■■□□□ 1.9
HERC2-204ENST00000563945 PCCAP05165 728 aaPredicted RBP26.95■■□□□ 1.9
HERC2-204ENST00000563945 CCDC30Q5VVM6 783 aa26.95■■□□□ 1.9
HERC2-204ENST00000563945 KCNQ5Q9NR82 932 aa26.95■■□□□ 1.9
HERC2-204ENST00000563945 PODXL2Q9NZ53 605 aa26.95■■□□□ 1.9
HERC2-204ENST00000563945 GBA2Q9HCG7 927 aaPredicted RBP26.94■■□□□ 1.9
HERC2-204ENST00000563945 KIF4BQ2VIQ3 1234 aa26.93■■□□□ 1.9
HERC2-204ENST00000563945 SULF1Q8IWU6 871 aa26.93■■□□□ 1.9
HERC2-204ENST00000563945 CCDC85AQ96PX6 553 aaPredicted RBP26.93■■□□□ 1.9
HERC2-204ENST00000563945 VIL1P09327 827 aaKnown RBP26.92■■□□□ 1.9
HERC2-204ENST00000563945 RGMBQ6NW40 437 aa26.92■■□□□ 1.9
HERC2-204ENST00000563945 ANKRD18AQ8IVF6 992 aa26.92■■□□□ 1.9
HERC2-204ENST00000563945 METTL22Q9BUU2 404 aaPredicted RBP26.92■■□□□ 1.9
HERC2-204ENST00000563945 JARID2Q92833 1246 aaPredicted RBP26.91■■□□□ 1.9
HERC2-204ENST00000563945 CCDC102AQ96A19 550 aa26.91■■□□□ 1.9
HERC2-204ENST00000563945 RTL9Q8NET4 1388 aa26.91■■□□□ 1.9
HERC2-204ENST00000563945 EGFRP00533 1210 aa26.9■■□□□ 1.9
HERC2-204ENST00000563945 DLK2Q6UY11 383 aa26.9■■□□□ 1.9
HERC2-204ENST00000563945 C8orf58Q8NAV2 365 aa26.9■■□□□ 1.9
HERC2-204ENST00000563945 ADM5C9JUS6 153 aa26.89■■□□□ 1.9
HERC2-204ENST00000563945 XDHP47989 1333 aa26.89■■□□□ 1.89
HERC2-204ENST00000563945 ZNF157P51786 506 aaPredicted RBP26.88■■□□□ 1.89
HERC2-204ENST00000563945 NEXNQ0ZGT2 675 aa26.88■■□□□ 1.89
HERC2-204ENST00000563945 AGBL3Q8NEM8 1001 aa26.88■■□□□ 1.89
HERC2-204ENST00000563945 CDC5LQ99459 802 aaKnown RBP26.88■■□□□ 1.89
HERC2-204ENST00000563945 GGA3Q9NZ52 723 aa26.88■■□□□ 1.89
HERC2-204ENST00000563945 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
HERC2-204ENST00000563945 ATP2B4P23634 1241 aa26.87■■□□□ 1.89
HERC2-204ENST00000563945 RSBN1LQ6PCB5 846 aaPredicted RBP26.87■■□□□ 1.89
HERC2-204ENST00000563945 STK31Q9BXU1 1019 aa26.87■■□□□ 1.89
HERC2-204ENST00000563945 POLR2AP24928 1970 aaKnown RBP26.86■■□□□ 1.89
HERC2-204ENST00000563945 FAM161AQ3B820 660 aa26.85■■□□□ 1.89
HERC2-204ENST00000563945 KSR2Q6VAB6 950 aa26.85■■□□□ 1.89
HERC2-204ENST00000563945 MCOLN1Q9GZU1 580 aa26.85■■□□□ 1.89
HERC2-204ENST00000563945 DGKZQ13574 1117 aa26.84■■□□□ 1.89
HERC2-204ENST00000563945 SCARF1Q14162 830 aa26.84■■□□□ 1.89
HERC2-204ENST00000563945 ZIC5Q96T25 663 aa26.84■■□□□ 1.89
HERC2-204ENST00000563945 COL4A1P02462 1669 aa26.83■■□□□ 1.89
HERC2-204ENST00000563945 PI4KAP2A4QPH2 592 aa26.83■■□□□ 1.89
HERC2-204ENST00000563945 USP17L8P0C7I0 530 aa26.83■■□□□ 1.89
HERC2-204ENST00000563945 KIF23Q02241 960 aaPredicted RBP26.83■■□□□ 1.89
HERC2-204ENST00000563945 MLLT1Q03111 559 aaPredicted RBP26.83■■□□□ 1.89
HERC2-204ENST00000563945 PODNQ7Z5L7 613 aa26.83■■□□□ 1.89
HERC2-204ENST00000563945 PI4KAP1Q8N8J0 262 aa26.83■■□□□ 1.89
HERC2-204ENST00000563945 CASP8AP2Q9UKL3 1982 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 USP17L3A6NCW0 530 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 USP17L4A6NCW7 530 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 CTSWP56202 376 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 ZNF280AP59817 542 aaPredicted RBP26.82■■□□□ 1.88
HERC2-204ENST00000563945 ANGEL2Q5VTE6 544 aaKnown RBP26.82■■□□□ 1.88
HERC2-204ENST00000563945 USP17L1Q7RTZ2 530 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 CDCA5Q96FF9 252 aa26.82■■□□□ 1.88
HERC2-204ENST00000563945 TSPYL6Q8N831 410 aa26.81■■□□□ 1.88
HERC2-204ENST00000563945 MYOZ2Q9NPC6 264 aa26.8■■□□□ 1.88
HERC2-204ENST00000563945 FAM155AB1AL88 458 aaPredicted RBP26.79■■□□□ 1.88
HERC2-204ENST00000563945 TTLL11Q8NHH1 800 aa26.79■■□□□ 1.88
HERC2-204ENST00000563945 FBXW7Q969H0 707 aa26.79■■□□□ 1.88
HERC2-204ENST00000563945 BSDC1Q9NW68 430 aaPredicted RBP26.79■■□□□ 1.88
HERC2-204ENST00000563945 SAGE1Q9NXZ1 904 aa26.79■■□□□ 1.88
HERC2-204ENST00000563945 ASTN2O75129 1339 aaPredicted RBP26.79■■□□□ 1.88
HERC2-204ENST00000563945 OGFOD1Q8N543 542 aa26.78■■□□□ 1.88
HERC2-204ENST00000563945 TSR2Q969E8 191 aaKnown RBP26.78■■□□□ 1.88
HERC2-204ENST00000563945 MINPP1Q9UNW1 487 aa26.78■■□□□ 1.88
HERC2-204ENST00000563945 SCN9AQ15858 1988 aa26.78■■□□□ 1.88
HERC2-204ENST00000563945 TRPA1O75762 1119 aa26.77■■□□□ 1.88
HERC2-204ENST00000563945 IGKV5-2P06315 115 aa26.77■■□□□ 1.88
HERC2-204ENST00000563945 IGHMBP2P38935 993 aaKnown RBP26.77■■□□□ 1.88
HERC2-204ENST00000563945 FKBP1BP68106 108 aa26.77■■□□□ 1.88
HERC2-204ENST00000563945 REM2Q8IYK8 340 aaPredicted RBP26.77■■□□□ 1.88
HERC2-204ENST00000563945 SLC10A3P09131 477 aa26.76■■□□□ 1.87
HERC2-204ENST00000563945 GMLQ99445 158 aa26.76■■□□□ 1.87
HERC2-204ENST00000563945 GREM2Q9H772 168 aa26.76■■□□□ 1.87
HERC2-204ENST00000563945 PITPNM2Q9BZ72 1349 aa26.75■■□□□ 1.87
HERC2-204ENST00000563945 SLC4A2P04920 1241 aa26.75■■□□□ 1.87
HERC2-204ENST00000563945 RGS19P49795 217 aa26.75■■□□□ 1.87
HERC2-204ENST00000563945 CCT4P50991 539 aaKnown RBP26.75■■□□□ 1.87
HERC2-204ENST00000563945 CWF19L2Q2TBE0 894 aaKnown RBP26.75■■□□□ 1.87
HERC2-204ENST00000563945 TWISTNBQ3B726 338 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms