RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ZNF165P49910 485 aa12.2□□□□□ -0.46
RNF40-204ENST00000563683 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
RNF40-204ENST00000563683 STAP2Q9UGK3 403 aa12.2□□□□□ -0.46
RNF40-204ENST00000563683 SLC27A2O14975 620 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
RNF40-204ENST00000563683 PDILTQ8N807 584 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
RNF40-204ENST00000563683 LRP2BPQ9P2M1 347 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 AOX1Q06278 1338 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 GOLGA8BA8MQT2 603 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 PAG1Q9NWQ8 432 aa12.19□□□□□ -0.46
RNF40-204ENST00000563683 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 TNNT1P13805 278 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 CEP57L1Q8IYX8 460 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
RNF40-204ENST00000563683 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
RNF40-204ENST00000563683 FPGT-TNNI3KV9GXZ4 949 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 BIN1O00499 593 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 PTGS1P23219 599 aa12.18□□□□□ -0.46
RNF40-204ENST00000563683 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 NACAP1Q9BZK3 213 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 DDX19AQ9NUU7 478 aaKnown RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 CPS1P31327 1500 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 A0A0D9SFI3 127 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 NEURL1BA8MQ27 555 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 IGSF3O75054 1194 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 FAM193AP78312 1265 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 ISM2Q6H9L7 571 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 KRT222Q8N1A0 295 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 ANKRD18BA2A2Z9 1011 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 ME3Q16798 604 aa12.17□□□□□ -0.46
RNF40-204ENST00000563683 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 TLR7Q9NYK1 1049 aaKnown RBP12.17□□□□□ -0.46
RNF40-204ENST00000563683 SERPINC1P01008 464 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
RNF40-204ENST00000563683 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
RNF40-204ENST00000563683 NAPBQ9H115 298 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 RAI14Q9P0K7 980 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
RNF40-204ENST00000563683 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 RAD21O60216 631 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 SALL3Q9BXA9 1300 aa12.16□□□□□ -0.46
RNF40-204ENST00000563683 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
RNF40-204ENST00000563683 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
RNF40-204ENST00000563683 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
RNF40-204ENST00000563683 AP5Z1O43299 807 aa12.15□□□□□ -0.46
RNF40-204ENST00000563683 XBP1P17861 261 aa12.15□□□□□ -0.46
RNF40-204ENST00000563683 ZNF397Q8NF99 534 aaPredicted RBP12.15□□□□□ -0.46
RNF40-204ENST00000563683 DNAJC25Q9H1X3 360 aa12.15□□□□□ -0.46
RNF40-204ENST00000563683 G3V3G9 751 aa12.15□□□□□ -0.47
RNF40-204ENST00000563683 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.47
RNF40-204ENST00000563683 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.47
RNF40-204ENST00000563683 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.47
RNF40-204ENST00000563683 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 EXOC5O00471 708 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 MARCH6O60337 910 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 JAK2O60674 1132 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 FAM177A1Q8N128 213 aaPredicted RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 UBAC1Q9BSL1 405 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 NEMFO60524 1076 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 CDKL5O76039 1030 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 IL2RBP14784 551 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 PHKG2P15735 406 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 PIP4K2BP78356 416 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 TYRO3Q06418 890 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 SLC9C2Q5TAH2 1124 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 KIF18AQ8NI77 898 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 CLTCQ00610 1675 aaKnown RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 TIGD1Q96MW7 591 aa12.14□□□□□ -0.47
RNF40-204ENST00000563683 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
RNF40-204ENST00000563683 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms