RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 KSR2Q6VAB6 950 aa16.46■□□□□ 0.22
GTF3C1-203ENST00000562609 LRRC8AQ8IWT6 810 aa16.46■□□□□ 0.22
GTF3C1-203ENST00000562609 STRN4Q9NRL3 753 aa16.46■□□□□ 0.22
GTF3C1-203ENST00000562609 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
GTF3C1-203ENST00000562609 PA2G4Q9UQ80 394 aaKnown RBP16.45■□□□□ 0.22
GTF3C1-203ENST00000562609 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
GTF3C1-203ENST00000562609 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 SKILP12757 684 aa16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 LRRN4CLQ8ND94 238 aa16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 PXDNLA1KZ92 1463 aa16.44■□□□□ 0.22
GTF3C1-203ENST00000562609 DTNBO60941 627 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 MYCBPQ99417 103 aaPredicted RBP16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 OSBPL3Q9H4L5 887 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 COL18A1P39060 1754 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 GPS2Q13227 327 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 XAGE3Q8WTP9 111 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 ZCCHC17Q9NP64 241 aaKnown RBP16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
GTF3C1-203ENST00000562609 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 CWC15Q9P013 229 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 CABP4P57796 275 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 POLA2Q14181 598 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 TMCO3Q6UWJ1 677 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 NCAPGQ9BPX3 1015 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
GTF3C1-203ENST00000562609 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 LIG1P18858 919 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 TNMDQ9H2S6 317 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 CLGNO14967 610 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 SRLQ86TD4 932 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 RRP15Q9Y3B9 282 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-203ENST00000562609 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 ZNF165P49910 485 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 IL25Q9H293 177 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 NEMFO60524 1076 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 GOLGA6L1Q8N7Z2 621 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-203ENST00000562609 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.22
GTF3C1-203ENST00000562609 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 MYD88Q99836 296 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 SIL1Q9H173 461 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 DNAJC25Q9H1X3 360 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 ARGLU1Q9NWB6 273 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 JRKLQ9Y4A0 524 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 CCDC69A6NI79 296 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 CHMLP26374 656 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 LARP1Q6PKG0 1096 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 L2HGDHQ9H9P8 463 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
GTF3C1-203ENST00000562609 GRM8O00222 908 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 OAS2P29728 719 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 FILIP1Q7Z7B0 1213 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 CDC25BP30305 580 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
GTF3C1-203ENST00000562609 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 KIF2AO00139 706 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 SEC31AO94979 1220 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 CCZ1BP86790 482 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 FBXO18Q8NFZ0 1043 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
GTF3C1-203ENST00000562609 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms