RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 USP50Q70EL3 339 aaPredicted RBP22.6■■□□□ 1.21
CMTM3-204ENST00000562357 ADARB2Q9NS39 739 aaKnown RBP22.6■■□□□ 1.21
CMTM3-204ENST00000562357 BSDC1Q9NW68 430 aaPredicted RBP22.6■■□□□ 1.21
CMTM3-204ENST00000562357 GPRC5DQ9NZD1 345 aa22.6■■□□□ 1.21
CMTM3-204ENST00000562357 COL4A1P02462 1669 aa22.59■■□□□ 1.21
CMTM3-204ENST00000562357 ATP2B4P23634 1241 aa22.59■■□□□ 1.21
CMTM3-204ENST00000562357 DNAJC5GQ8N7S2 189 aa22.59■■□□□ 1.21
CMTM3-204ENST00000562357 KLRG1Q96E93 195 aa22.59■■□□□ 1.21
CMTM3-204ENST00000562357 MPHOSPH8Q99549 860 aa22.59■■□□□ 1.21
CMTM3-204ENST00000562357 C9orf78Q9NZ63 289 aaPredicted RBP22.59■■□□□ 1.21
CMTM3-204ENST00000562357 ECE2O60344 883 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 ALDH1L1O75891 902 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 ITGA6P23229 1130 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 CASP7P55210 303 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 DOK7Q18PE1 504 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 FAM161AQ3B820 660 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 SRCIN1Q9C0H9 1055 aa22.58■■□□□ 1.21
CMTM3-204ENST00000562357 YDJCA8MPS7 323 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 GRM8O00222 908 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 MAP1SQ66K74 1059 aaPredicted RBP22.57■■□□□ 1.2
CMTM3-204ENST00000562357 CNTROBQ8N137 903 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 GPR101Q96P66 508 aaPredicted RBP22.57■■□□□ 1.2
CMTM3-204ENST00000562357 CREBZFQ9NS37 354 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 CHMP3Q9Y3E7 222 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 MYH3P11055 1940 aa22.57■■□□□ 1.2
CMTM3-204ENST00000562357 ANKRD18BA2A2Z9 1011 aa22.56■■□□□ 1.2
CMTM3-204ENST00000562357 H7C1D1 291 aa22.56■■□□□ 1.2
CMTM3-204ENST00000562357 PTPRCP08575 1304 aa22.56■■□□□ 1.2
CMTM3-204ENST00000562357 LTBP1Q14766 1721 aa22.55■■□□□ 1.2
CMTM3-204ENST00000562357 CSF1RP07333 972 aa22.55■■□□□ 1.2
CMTM3-204ENST00000562357 DIEXFQ68CQ4 756 aaKnown RBP22.55■■□□□ 1.2
CMTM3-204ENST00000562357 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
CMTM3-204ENST00000562357 MINPP1Q9UNW1 487 aa22.55■■□□□ 1.2
CMTM3-204ENST00000562357 PASKQ96RG2 1323 aa22.55■■□□□ 1.2
CMTM3-204ENST00000562357 PSMD14O00487 310 aa22.54■■□□□ 1.2
CMTM3-204ENST00000562357 RPS12P25398 132 aaKnown RBP22.54■■□□□ 1.2
CMTM3-204ENST00000562357 IFIT5Q13325 482 aaKnown RBP22.54■■□□□ 1.2
CMTM3-204ENST00000562357 CDCA7LQ96GN5 454 aa22.54■■□□□ 1.2
CMTM3-204ENST00000562357 ANKRD2Q9GZV1 360 aa22.54■■□□□ 1.2
CMTM3-204ENST00000562357 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-204ENST00000562357 CT47B1P0C2W7 299 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-204ENST00000562357 ALDH1L2Q3SY69 923 aa22.53■■□□□ 1.2
CMTM3-204ENST00000562357 TAF7LQ5H9L4 462 aa22.53■■□□□ 1.2
CMTM3-204ENST00000562357 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
CMTM3-204ENST00000562357 SMC4Q9NTJ3 1288 aa22.53■■□□□ 1.2
CMTM3-204ENST00000562357 CNOT7Q9UIV1 285 aaKnown RBP22.53■■□□□ 1.2
CMTM3-204ENST00000562357 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
CMTM3-204ENST00000562357 TMEM88BA6NKF7 163 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 KCNJ4P48050 445 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 CCDC57Q2TAC2 916 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 MICALL2Q8IY33 904 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 DPF2Q92785 391 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 LEMD3Q9Y2U8 911 aa22.52■■□□□ 1.2
CMTM3-204ENST00000562357 MED23Q9ULK4 1368 aa22.51■■□□□ 1.19
CMTM3-204ENST00000562357 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
CMTM3-204ENST00000562357 ZBTB12Q9Y330 459 aaPredicted RBP22.51■■□□□ 1.19
CMTM3-204ENST00000562357 FOXO4P98177 505 aa22.5■■□□□ 1.19
CMTM3-204ENST00000562357 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
CMTM3-204ENST00000562357 PODNQ7Z5L7 613 aa22.49■■□□□ 1.19
CMTM3-204ENST00000562357 JMYQ8N9B5 988 aa22.49■■□□□ 1.19
CMTM3-204ENST00000562357 ZC3H15Q8WU90 426 aaKnown RBP22.49■■□□□ 1.19
CMTM3-204ENST00000562357 TRMT2AQ8IZ69 625 aaKnown RBP22.48■■□□□ 1.19
CMTM3-204ENST00000562357 MKRN1Q9UHC7 482 aaKnown RBP22.48■■□□□ 1.19
CMTM3-204ENST00000562357 ZNF804BA4D1E1 1349 aa22.48■■□□□ 1.19
CMTM3-204ENST00000562357 VIL1P09327 827 aaKnown RBP22.47■■□□□ 1.19
CMTM3-204ENST00000562357 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
CMTM3-204ENST00000562357 SPEF2Q9C093 1822 aa22.46■■□□□ 1.19
CMTM3-204ENST00000562357 CHRNDQ07001 517 aa22.46■■□□□ 1.19
CMTM3-204ENST00000562357 MIER1Q8N108 512 aa22.46■■□□□ 1.19
CMTM3-204ENST00000562357 TRPM4Q8TD43 1214 aa22.46■■□□□ 1.19
CMTM3-204ENST00000562357 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
CMTM3-204ENST00000562357 ABT1Q9ULW3 272 aaKnown RBP22.46■■□□□ 1.19
CMTM3-204ENST00000562357 USP17L3A6NCW0 530 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 USP17L4A6NCW7 530 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 EPHA10Q5JZY3 1008 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 RSBN1LQ6PCB5 846 aaPredicted RBP22.45■■□□□ 1.18
CMTM3-204ENST00000562357 USP17L1Q7RTZ2 530 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 AGBL3Q8NEM8 1001 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 CNNM1Q9NRU3 951 aa22.45■■□□□ 1.18
CMTM3-204ENST00000562357 SHTN1A0MZ66 631 aa22.44■■□□□ 1.18
CMTM3-204ENST00000562357 NBPF7P0C2Y1 421 aaPredicted RBP22.44■■□□□ 1.18
CMTM3-204ENST00000562357 TBC1D10BQ4KMP7 808 aaPredicted RBP22.44■■□□□ 1.18
CMTM3-204ENST00000562357 LDHAL6AQ6ZMR3 332 aa22.44■■□□□ 1.18
CMTM3-204ENST00000562357 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
CMTM3-204ENST00000562357 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
CMTM3-204ENST00000562357 SUCLG2Q96I99 432 aa22.44■■□□□ 1.18
CMTM3-204ENST00000562357 CNTNAP1P78357 1384 aa22.43■■□□□ 1.18
CMTM3-204ENST00000562357 UTYO14607 1347 aa22.43■■□□□ 1.18
CMTM3-204ENST00000562357 RBM26Q5T8P6 1007 aaKnown RBP22.43■■□□□ 1.18
CMTM3-204ENST00000562357 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
CMTM3-204ENST00000562357 PGAP2Q9UHJ9 254 aa22.43■■□□□ 1.18
CMTM3-204ENST00000562357 TRAF5O00463 557 aa22.42■■□□□ 1.18
CMTM3-204ENST00000562357 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
CMTM3-204ENST00000562357 KIF4BQ2VIQ3 1234 aa22.42■■□□□ 1.18
CMTM3-204ENST00000562357 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
CMTM3-204ENST00000562357 ZNF609O15014 1411 aa22.41■■□□□ 1.18
CMTM3-204ENST00000562357 MYO3BQ8WXR4 1341 aa22.41■■□□□ 1.18
CMTM3-204ENST00000562357 WTIPA6NIX2 430 aaPredicted RBP22.41■■□□□ 1.18
CMTM3-204ENST00000562357 DCPSQ96C86 337 aaKnown RBP22.41■■□□□ 1.18
CMTM3-204ENST00000562357 ZNF594Q96JF6 807 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms