RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 KSR2Q6VAB6 950 aa23.79■■□□□ 1.4
TPM1-224ENST00000560615 ANKRD18AQ8IVF6 992 aa23.79■■□□□ 1.4
TPM1-224ENST00000560615 MAP3K2Q9Y2U5 619 aa23.79■■□□□ 1.4
TPM1-224ENST00000560615 ZBTB12Q9Y330 459 aaPredicted RBP23.79■■□□□ 1.4
TPM1-224ENST00000560615 UFL1O94874 794 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 HIRAP54198 1017 aaPredicted RBP23.78■■□□□ 1.4
TPM1-224ENST00000560615 DOK7Q18PE1 504 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 SAPCD2Q86UD0 394 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 TRPM4Q8TD43 1214 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 CDC5LQ99459 802 aaKnown RBP23.78■■□□□ 1.4
TPM1-224ENST00000560615 ZNF408Q9H9D4 720 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 SEC31BQ9NQW1 1179 aa23.78■■□□□ 1.4
TPM1-224ENST00000560615 LRRC37AA6NMS7 1700 aa23.77■■□□□ 1.4
TPM1-224ENST00000560615 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
TPM1-224ENST00000560615 DCPSQ96C86 337 aaKnown RBP23.77■■□□□ 1.4
TPM1-224ENST00000560615 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
TPM1-224ENST00000560615 DUOX1Q9NRD9 1551 aa23.76■■□□□ 1.39
TPM1-224ENST00000560615 PI4KAP2A4QPH2 592 aa23.75■■□□□ 1.39
TPM1-224ENST00000560615 HSPA8P11142 646 aaKnown RBP23.75■■□□□ 1.39
TPM1-224ENST00000560615 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
TPM1-224ENST00000560615 WWC1Q8IX03 1113 aa23.75■■□□□ 1.39
TPM1-224ENST00000560615 PI4KAP1Q8N8J0 262 aa23.75■■□□□ 1.39
TPM1-224ENST00000560615 XDHP47989 1333 aa23.75■■□□□ 1.39
TPM1-224ENST00000560615 CA12O43570 354 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 ATP2B4P23634 1241 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
TPM1-224ENST00000560615 TBC1D10BQ4KMP7 808 aaPredicted RBP23.74■■□□□ 1.39
TPM1-224ENST00000560615 SAMD7Q7Z3H4 446 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 USP48Q86UV5 1035 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 TSPYL6Q8N831 410 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 TSR2Q969E8 191 aaKnown RBP23.74■■□□□ 1.39
TPM1-224ENST00000560615 IL16Q14005 1332 aa23.74■■□□□ 1.39
TPM1-224ENST00000560615 VIL1P09327 827 aaKnown RBP23.73■■□□□ 1.39
TPM1-224ENST00000560615 CTSWP56202 376 aa23.73■■□□□ 1.39
TPM1-224ENST00000560615 RBM26Q5T8P6 1007 aaKnown RBP23.73■■□□□ 1.39
TPM1-224ENST00000560615 KRT26Q7Z3Y9 468 aa23.73■■□□□ 1.39
TPM1-224ENST00000560615 CCDC85AQ96PX6 553 aaPredicted RBP23.73■■□□□ 1.39
TPM1-224ENST00000560615 JARID2Q92833 1246 aaPredicted RBP23.72■■□□□ 1.39
TPM1-224ENST00000560615 SHTN1A0MZ66 631 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 ANP32CO43423 234 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 KIF4BQ2VIQ3 1234 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 C2orf69Q8N8R5 385 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 AGBL3Q8NEM8 1001 aa23.71■■□□□ 1.39
TPM1-224ENST00000560615 RTL9Q8NET4 1388 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 NOGQ13253 232 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 PODNQ7Z5L7 613 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 SULF1Q8IWU6 871 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 KCNQ5Q9NR82 932 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 BSDC1Q9NW68 430 aaPredicted RBP23.7■■□□□ 1.38
TPM1-224ENST00000560615 TAF1P21675 1872 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 TRPM7Q96QT4 1865 aa23.7■■□□□ 1.38
TPM1-224ENST00000560615 IGKV5-2P06315 115 aa23.69■■□□□ 1.38
TPM1-224ENST00000560615 HUNKP57058 714 aa23.69■■□□□ 1.38
TPM1-224ENST00000560615 TTLL11Q8NHH1 800 aa23.69■■□□□ 1.38
TPM1-224ENST00000560615 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
TPM1-224ENST00000560615 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
TPM1-224ENST00000560615 AOC2O75106 756 aa23.68■■□□□ 1.38
TPM1-224ENST00000560615 IGHMBP2P38935 993 aaKnown RBP23.68■■□□□ 1.38
TPM1-224ENST00000560615 BRPF1P55201 1214 aaPredicted RBP23.68■■□□□ 1.38
TPM1-224ENST00000560615 RSBN1LQ6PCB5 846 aaPredicted RBP23.68■■□□□ 1.38
TPM1-224ENST00000560615 GBA2Q9HCG7 927 aaPredicted RBP23.67■■□□□ 1.38
TPM1-224ENST00000560615 USP17L3A6NCW0 530 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 USP17L4A6NCW7 530 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
TPM1-224ENST00000560615 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 USP17L1Q7RTZ2 530 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 CCDC102AQ96A19 550 aa23.66■■□□□ 1.38
TPM1-224ENST00000560615 H7C1W4 665 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 USP17L8P0C7I0 530 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 FLIIQ13045 1269 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 FKBP5Q13451 457 aaPredicted RBP23.65■■□□□ 1.38
TPM1-224ENST00000560615 UBE3BQ7Z3V4 1068 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 GREM2Q9H772 168 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
TPM1-224ENST00000560615 THSD7BQ9C0I4 1608 aa23.64■■□□□ 1.38
TPM1-224ENST00000560615 ZNF280AP59817 542 aaPredicted RBP23.64■■□□□ 1.37
TPM1-224ENST00000560615 RGMBQ6NW40 437 aa23.64■■□□□ 1.37
TPM1-224ENST00000560615 GGA3Q9NZ52 723 aa23.64■■□□□ 1.37
TPM1-224ENST00000560615 LEMD3Q9Y2U8 911 aa23.64■■□□□ 1.37
TPM1-224ENST00000560615 ZNF609O15014 1411 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 EGFRP00533 1210 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
TPM1-224ENST00000560615 GCKRQ14397 625 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 OGFOD1Q8N543 542 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 DNAAF4Q8WXU2 420 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 MPHOSPH8Q99549 860 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 ANKRD2Q9GZV1 360 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 MED23Q9ULK4 1368 aa23.63■■□□□ 1.37
TPM1-224ENST00000560615 ADM5C9JUS6 153 aa23.62■■□□□ 1.37
TPM1-224ENST00000560615 MMP14P50281 582 aa23.62■■□□□ 1.37
TPM1-224ENST00000560615 G2E3Q7L622 706 aa23.62■■□□□ 1.37
TPM1-224ENST00000560615 LINS1Q8NG48 757 aa23.62■■□□□ 1.37
TPM1-224ENST00000560615 PLA2G12BQ9BX93 195 aa23.62■■□□□ 1.37
TPM1-224ENST00000560615 MYO3BQ8WXR4 1341 aa23.61■■□□□ 1.37
TPM1-224ENST00000560615 COL4A1P02462 1669 aa23.61■■□□□ 1.37
TPM1-224ENST00000560615 SCARF1Q14162 830 aa23.61■■□□□ 1.37
TPM1-224ENST00000560615 COA1Q9GZY4 146 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms