RNA–Protein interactions for RNA: ENST00000560300.1

RORA-213, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-213ENST00000560300 PODXL2Q9NZ53 605 aa22.28■■□□□ 1.16
RORA-213ENST00000560300 MAP3K2Q9Y2U5 619 aa22.28■■□□□ 1.16
RORA-213ENST00000560300 CELF2O95319 508 aaKnown RBP22.27■■□□□ 1.16
RORA-213ENST00000560300 ECE1P42892 770 aa22.27■■□□□ 1.16
RORA-213ENST00000560300 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
RORA-213ENST00000560300 CCDC85AQ96PX6 553 aaPredicted RBP22.27■■□□□ 1.16
RORA-213ENST00000560300 CHMP4AQ9BY43 222 aa22.27■■□□□ 1.16
RORA-213ENST00000560300 HSPA8P11142 646 aaKnown RBP22.26■■□□□ 1.15
RORA-213ENST00000560300 LBX1P52954 281 aa22.26■■□□□ 1.15
RORA-213ENST00000560300 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
RORA-213ENST00000560300 GRM1Q13255 1194 aa22.26■■□□□ 1.15
RORA-213ENST00000560300 SAMD7Q7Z3H4 446 aa22.26■■□□□ 1.15
RORA-213ENST00000560300 WWC1Q8IX03 1113 aa22.26■■□□□ 1.15
RORA-213ENST00000560300 PI4KAP2A4QPH2 592 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 UFL1O94874 794 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 EGFRP00533 1210 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 IGKV5-2P06315 115 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 KSR2Q6VAB6 950 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 SAPCD2Q86UD0 394 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 PI4KAP1Q8N8J0 262 aa22.25■■□□□ 1.15
RORA-213ENST00000560300 MYH3P11055 1940 aa22.24■■□□□ 1.15
RORA-213ENST00000560300 RPS12P25398 132 aaKnown RBP22.24■■□□□ 1.15
RORA-213ENST00000560300 CDC37L1Q7L3B6 337 aa22.24■■□□□ 1.15
RORA-213ENST00000560300 ZC3H12CQ9C0D7 883 aaKnown RBP22.24■■□□□ 1.15
RORA-213ENST00000560300 ZNF408Q9H9D4 720 aa22.24■■□□□ 1.15
RORA-213ENST00000560300 ANKIB1Q9P2G1 1089 aa22.24■■□□□ 1.15
RORA-213ENST00000560300 TBC1D10BQ4KMP7 808 aaPredicted RBP22.23■■□□□ 1.15
RORA-213ENST00000560300 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
RORA-213ENST00000560300 GGA1Q9UJY5 639 aa22.23■■□□□ 1.15
RORA-213ENST00000560300 PSME4Q14997 1843 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 POLR2AP24928 1970 aaKnown RBP22.22■■□□□ 1.15
RORA-213ENST00000560300 CTSWP56202 376 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 TWISTNBQ3B726 338 aaPredicted RBP22.22■■□□□ 1.15
RORA-213ENST00000560300 DLK2Q6UY11 383 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 G2E3Q7L622 706 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 USP48Q86UV5 1035 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 SPEF2Q9C093 1822 aa22.22■■□□□ 1.15
RORA-213ENST00000560300 AOC2O75106 756 aa22.21■■□□□ 1.15
RORA-213ENST00000560300 IL16Q14005 1332 aa22.21■■□□□ 1.15
RORA-213ENST00000560300 VIL1P09327 827 aaKnown RBP22.2■■□□□ 1.14
RORA-213ENST00000560300 CWF19L2Q2TBE0 894 aaKnown RBP22.2■■□□□ 1.14
RORA-213ENST00000560300 HHIPL1Q96JK4 782 aa22.2■■□□□ 1.14
RORA-213ENST00000560300 XDHP47989 1333 aa22.2■■□□□ 1.14
RORA-213ENST00000560300 NEURL1BA8MQ27 555 aa22.19■■□□□ 1.14
RORA-213ENST00000560300 MAP2K2P36507 400 aa22.19■■□□□ 1.14
RORA-213ENST00000560300 NEXNQ0ZGT2 675 aa22.19■■□□□ 1.14
RORA-213ENST00000560300 RBM26Q5T8P6 1007 aaKnown RBP22.19■■□□□ 1.14
RORA-213ENST00000560300 TTLL11Q8NHH1 800 aa22.19■■□□□ 1.14
RORA-213ENST00000560300 ZNF609O15014 1411 aa22.18■■□□□ 1.14
RORA-213ENST00000560300 SLC4A2P04920 1241 aa22.18■■□□□ 1.14
RORA-213ENST00000560300 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
RORA-213ENST00000560300 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
RORA-213ENST00000560300 GREM2Q9H772 168 aa22.18■■□□□ 1.14
RORA-213ENST00000560300 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
RORA-213ENST00000560300 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
RORA-213ENST00000560300 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
RORA-213ENST00000560300 G3V3G9 751 aa22.17■■□□□ 1.14
RORA-213ENST00000560300 KIF4BQ2VIQ3 1234 aa22.17■■□□□ 1.14
RORA-213ENST00000560300 DCAF8Q5TAQ9 597 aa22.17■■□□□ 1.14
RORA-213ENST00000560300 KRT26Q7Z3Y9 468 aa22.17■■□□□ 1.14
RORA-213ENST00000560300 ADM5C9JUS6 153 aa22.16■■□□□ 1.14
RORA-213ENST00000560300 ATP2B4P23634 1241 aa22.16■■□□□ 1.14
RORA-213ENST00000560300 BEGAINQ9BUH8 593 aa22.16■■□□□ 1.14
RORA-213ENST00000560300 CACNA1FO60840 1977 aa22.16■■□□□ 1.14
RORA-213ENST00000560300 ASTN2O75129 1339 aaPredicted RBP22.15■■□□□ 1.14
RORA-213ENST00000560300 H7C1W4 665 aa22.15■■□□□ 1.14
RORA-213ENST00000560300 RSBN1LQ6PCB5 846 aaPredicted RBP22.15■■□□□ 1.14
RORA-213ENST00000560300 UBE3BQ7Z3V4 1068 aa22.15■■□□□ 1.14
RORA-213ENST00000560300 DCPSQ96C86 337 aaKnown RBP22.15■■□□□ 1.14
RORA-213ENST00000560300 HUNKP57058 714 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 ZNF280AP59817 542 aaPredicted RBP22.14■■□□□ 1.13
RORA-213ENST00000560300 FLIIQ13045 1269 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 AGBL3Q8NEM8 1001 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 BSDC1Q9NW68 430 aaPredicted RBP22.14■■□□□ 1.13
RORA-213ENST00000560300 GGA3Q9NZ52 723 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 TSKSQ9UJT2 592 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 MINPP1Q9UNW1 487 aa22.14■■□□□ 1.13
RORA-213ENST00000560300 ZNF646O15015 1829 aaPredicted RBP22.14■■□□□ 1.13
RORA-213ENST00000560300 MED23Q9ULK4 1368 aa22.13■■□□□ 1.13
RORA-213ENST00000560300 GCKRQ14397 625 aa22.13■■□□□ 1.13
RORA-213ENST00000560300 GMLQ99445 158 aa22.13■■□□□ 1.13
RORA-213ENST00000560300 BRPF1P55201 1214 aaPredicted RBP22.12■■□□□ 1.13
RORA-213ENST00000560300 CASP7P55210 303 aa22.12■■□□□ 1.13
RORA-213ENST00000560300 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
RORA-213ENST00000560300 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
RORA-213ENST00000560300 ANP32CO43423 234 aa22.11■■□□□ 1.13
RORA-213ENST00000560300 PODNQ7Z5L7 613 aa22.11■■□□□ 1.13
RORA-213ENST00000560300 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
RORA-213ENST00000560300 ZIC5Q96T25 663 aa22.11■■□□□ 1.13
RORA-213ENST00000560300 PLA2G12BQ9BX93 195 aa22.11■■□□□ 1.13
RORA-213ENST00000560300 GBA2Q9HCG7 927 aaPredicted RBP22.11■■□□□ 1.13
RORA-213ENST00000560300 USP17L3A6NCW0 530 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 USP17L4A6NCW7 530 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 VAMP4O75379 141 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
RORA-213ENST00000560300 USP17L1Q7RTZ2 530 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 SULF1Q8IWU6 871 aa22.1■■□□□ 1.13
RORA-213ENST00000560300 USP17L8P0C7I0 530 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms