RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 CWC25Q9NXE8 425 aaPredicted RBP22.46■■□□□ 1.19
CRTC3-208ENST00000560098 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
CRTC3-208ENST00000560098 RPS12P25398 132 aaKnown RBP22.45■■□□□ 1.18
CRTC3-208ENST00000560098 MAP2K2P36507 400 aa22.45■■□□□ 1.18
CRTC3-208ENST00000560098 CCDC152Q4G0S7 254 aa22.45■■□□□ 1.18
CRTC3-208ENST00000560098 HHIPL1Q96JK4 782 aa22.45■■□□□ 1.18
CRTC3-208ENST00000560098 METTL22Q9BUU2 404 aaPredicted RBP22.45■■□□□ 1.18
CRTC3-208ENST00000560098 ZC3H12CQ9C0D7 883 aaKnown RBP22.45■■□□□ 1.18
CRTC3-208ENST00000560098 PDE8AO60658 829 aa22.44■■□□□ 1.18
CRTC3-208ENST00000560098 AOC2O75106 756 aa22.44■■□□□ 1.18
CRTC3-208ENST00000560098 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
CRTC3-208ENST00000560098 KCNQ5Q9NR82 932 aa22.44■■□□□ 1.18
CRTC3-208ENST00000560098 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
CRTC3-208ENST00000560098 TBC1D10BQ4KMP7 808 aaPredicted RBP22.43■■□□□ 1.18
CRTC3-208ENST00000560098 USP48Q86UV5 1035 aa22.43■■□□□ 1.18
CRTC3-208ENST00000560098 JARID2Q92833 1246 aaPredicted RBP22.43■■□□□ 1.18
CRTC3-208ENST00000560098 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
CRTC3-208ENST00000560098 UFL1O94874 794 aa22.42■■□□□ 1.18
CRTC3-208ENST00000560098 TSPYL6Q8N831 410 aa22.42■■□□□ 1.18
CRTC3-208ENST00000560098 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
CRTC3-208ENST00000560098 GGA1Q9UJY5 639 aa22.41■■□□□ 1.18
CRTC3-208ENST00000560098 MAP3K2Q9Y2U5 619 aa22.41■■□□□ 1.18
CRTC3-208ENST00000560098 G3V3G9 751 aa22.4■■□□□ 1.18
CRTC3-208ENST00000560098 EGFRP00533 1210 aa22.4■■□□□ 1.18
CRTC3-208ENST00000560098 DCAF8Q5TAQ9 597 aa22.4■■□□□ 1.18
CRTC3-208ENST00000560098 VIL1P09327 827 aaKnown RBP22.4■■□□□ 1.18
CRTC3-208ENST00000560098 RBM26Q5T8P6 1007 aaKnown RBP22.4■■□□□ 1.18
CRTC3-208ENST00000560098 KSR2Q6VAB6 950 aa22.4■■□□□ 1.18
CRTC3-208ENST00000560098 KRT26Q7Z3Y9 468 aa22.39■■□□□ 1.17
CRTC3-208ENST00000560098 ANKRD18AQ8IVF6 992 aa22.39■■□□□ 1.17
CRTC3-208ENST00000560098 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.17
CRTC3-208ENST00000560098 PI4KAP2A4QPH2 592 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 IGKV5-2P06315 115 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 CCDC27Q2M243 656 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 CCDC184Q52MB2 194 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 DLK2Q6UY11 383 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 PI4KAP1Q8N8J0 262 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 DCPSQ96C86 337 aaKnown RBP22.38■■□□□ 1.17
CRTC3-208ENST00000560098 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
CRTC3-208ENST00000560098 BRPF1P55201 1214 aaPredicted RBP22.37■■□□□ 1.17
CRTC3-208ENST00000560098 CTSWP56202 376 aa22.37■■□□□ 1.17
CRTC3-208ENST00000560098 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
CRTC3-208ENST00000560098 XDHP47989 1333 aa22.37■■□□□ 1.17
CRTC3-208ENST00000560098 CA12O43570 354 aa22.36■■□□□ 1.17
CRTC3-208ENST00000560098 HUNKP57058 714 aa22.36■■□□□ 1.17
CRTC3-208ENST00000560098 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
CRTC3-208ENST00000560098 CDC5LQ99459 802 aaKnown RBP22.36■■□□□ 1.17
CRTC3-208ENST00000560098 ADM5C9JUS6 153 aa22.35■■□□□ 1.17
CRTC3-208ENST00000560098 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
CRTC3-208ENST00000560098 ABHD8Q96I13 439 aa22.35■■□□□ 1.17
CRTC3-208ENST00000560098 TSKSQ9UJT2 592 aa22.35■■□□□ 1.17
CRTC3-208ENST00000560098 SCN9AQ15858 1988 aa22.34■■□□□ 1.17
CRTC3-208ENST00000560098 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
CRTC3-208ENST00000560098 NOGQ13253 232 aa22.34■■□□□ 1.17
CRTC3-208ENST00000560098 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
CRTC3-208ENST00000560098 RSBN1LQ6PCB5 846 aaPredicted RBP22.34■■□□□ 1.17
CRTC3-208ENST00000560098 TTLL11Q8NHH1 800 aa22.34■■□□□ 1.17
CRTC3-208ENST00000560098 ZNF609O15014 1411 aa22.34■■□□□ 1.17
CRTC3-208ENST00000560098 ZNF280AP59817 542 aaPredicted RBP22.33■■□□□ 1.17
CRTC3-208ENST00000560098 C2orf69Q8N8R5 385 aa22.33■■□□□ 1.17
CRTC3-208ENST00000560098 AGBL3Q8NEM8 1001 aa22.33■■□□□ 1.17
CRTC3-208ENST00000560098 GBA2Q9HCG7 927 aaPredicted RBP22.33■■□□□ 1.17
CRTC3-208ENST00000560098 GGA3Q9NZ52 723 aa22.33■■□□□ 1.17
CRTC3-208ENST00000560098 CWF19L2Q2TBE0 894 aaKnown RBP22.32■■□□□ 1.16
CRTC3-208ENST00000560098 SULF1Q8IWU6 871 aa22.32■■□□□ 1.16
CRTC3-208ENST00000560098 GREM2Q9H772 168 aa22.32■■□□□ 1.16
CRTC3-208ENST00000560098 IL16Q14005 1332 aa22.32■■□□□ 1.16
CRTC3-208ENST00000560098 NEURL1BA8MQ27 555 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 G2E3Q7L622 706 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 PODNQ7Z5L7 613 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
CRTC3-208ENST00000560098 RGMBQ6NW40 437 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 ZIC5Q96T25 663 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
CRTC3-208ENST00000560098 ASTN2O75129 1339 aaPredicted RBP22.3■■□□□ 1.16
CRTC3-208ENST00000560098 USP17L3A6NCW0 530 aa22.3■■□□□ 1.16
CRTC3-208ENST00000560098 USP17L4A6NCW7 530 aa22.3■■□□□ 1.16
CRTC3-208ENST00000560098 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
CRTC3-208ENST00000560098 USP17L1Q7RTZ2 530 aa22.3■■□□□ 1.16
CRTC3-208ENST00000560098 GMLQ99445 158 aa22.3■■□□□ 1.16
CRTC3-208ENST00000560098 WTIPA6NIX2 430 aaPredicted RBP22.29■■□□□ 1.16
CRTC3-208ENST00000560098 H7C1W4 665 aa22.29■■□□□ 1.16
CRTC3-208ENST00000560098 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
CRTC3-208ENST00000560098 SCARF1Q14162 830 aa22.29■■□□□ 1.16
CRTC3-208ENST00000560098 UBE3BQ7Z3V4 1068 aa22.29■■□□□ 1.16
CRTC3-208ENST00000560098 MED23Q9ULK4 1368 aa22.28■■□□□ 1.16
CRTC3-208ENST00000560098 FAM155AB1AL88 458 aaPredicted RBP22.28■■□□□ 1.16
CRTC3-208ENST00000560098 ANGEL2Q5VTE6 544 aaKnown RBP22.28■■□□□ 1.16
CRTC3-208ENST00000560098 CCDC102AQ96A19 550 aa22.28■■□□□ 1.16
CRTC3-208ENST00000560098 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
CRTC3-208ENST00000560098 CCT4P50991 539 aaKnown RBP22.27■■□□□ 1.16
CRTC3-208ENST00000560098 FLIIQ13045 1269 aa22.27■■□□□ 1.16
CRTC3-208ENST00000560098 CDCA5Q96FF9 252 aa22.27■■□□□ 1.16
CRTC3-208ENST00000560098 POLR2AP24928 1970 aaKnown RBP22.27■■□□□ 1.16
CRTC3-208ENST00000560098 ZNF157P51786 506 aaPredicted RBP22.26■■□□□ 1.15
CRTC3-208ENST00000560098 GCKRQ14397 625 aa22.26■■□□□ 1.15
CRTC3-208ENST00000560098 PSME4Q14997 1843 aa22.26■■□□□ 1.15
CRTC3-208ENST00000560098 IGHMBP2P38935 993 aaKnown RBP22.25■■□□□ 1.15
CRTC3-208ENST00000560098 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms