RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 A1BGP04217 495 aa12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 PTPN12Q05209 780 aaKnown RBP12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 OTUD7BQ6GQQ9 843 aa12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
PPP1R3E-204ENST00000559942 TAF1P21675 1872 aa12.85□□□□□ -0.35
PPP1R3E-204ENST00000559942 SCARF1Q14162 830 aa12.85□□□□□ -0.35
PPP1R3E-204ENST00000559942 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
PPP1R3E-204ENST00000559942 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
PPP1R3E-204ENST00000559942 GJB1P08034 283 aa12.84□□□□□ -0.35
PPP1R3E-204ENST00000559942 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
PPP1R3E-204ENST00000559942 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
PPP1R3E-204ENST00000559942 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
PPP1R3E-204ENST00000559942 CARD14Q9BXL6 1004 aa12.84□□□□□ -0.35
PPP1R3E-204ENST00000559942 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 NF2P35240 595 aa12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 CDX2Q99626 313 aaPredicted RBP12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
PPP1R3E-204ENST00000559942 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
PPP1R3E-204ENST00000559942 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
PPP1R3E-204ENST00000559942 C1QTNF1Q9BXJ1 281 aa12.82□□□□□ -0.36
PPP1R3E-204ENST00000559942 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
PPP1R3E-204ENST00000559942 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
PPP1R3E-204ENST00000559942 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 UBE2OQ9C0C9 1292 aaKnown RBP12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
PPP1R3E-204ENST00000559942 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
PPP1R3E-204ENST00000559942 SLC10A4Q96EP9 437 aa12.8□□□□□ -0.36
PPP1R3E-204ENST00000559942 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
PPP1R3E-204ENST00000559942 HEG1Q9ULI3 1381 aa12.8□□□□□ -0.36
PPP1R3E-204ENST00000559942 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
PPP1R3E-204ENST00000559942 PRKG1Q13976 671 aa12.79□□□□□ -0.36
PPP1R3E-204ENST00000559942 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
PPP1R3E-204ENST00000559942 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
PPP1R3E-204ENST00000559942 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
PPP1R3E-204ENST00000559942 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 RGL2O15211 777 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 CCL5P13501 91 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 BDP1A6H8Y1 2624 aa12.78□□□□□ -0.36
PPP1R3E-204ENST00000559942 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
PPP1R3E-204ENST00000559942 PRMT2P55345 433 aa12.77□□□□□ -0.37
PPP1R3E-204ENST00000559942 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
PPP1R3E-204ENST00000559942 WNK4Q96J92 1243 aa12.77□□□□□ -0.37
PPP1R3E-204ENST00000559942 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
PPP1R3E-204ENST00000559942 SYN1P17600 705 aa12.76□□□□□ -0.37
PPP1R3E-204ENST00000559942 KIF22Q14807 665 aa12.76□□□□□ -0.37
PPP1R3E-204ENST00000559942 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
PPP1R3E-204ENST00000559942 LAMB1P07942 1786 aa12.76□□□□□ -0.37
PPP1R3E-204ENST00000559942 BBOX1O75936 387 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 SGPL1O95470 568 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 GNRH1P01148 92 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 ZNF280AP59817 542 aaPredicted RBP12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 SULT6B1Q6IMI4 303 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 MYLIPQ8WY64 445 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 NECTIN2Q92692 538 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 PTPN18Q99952 460 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 ARHGAP39Q9C0H5 1083 aa12.75□□□□□ -0.37
PPP1R3E-204ENST00000559942 VIL1P09327 827 aaKnown RBP12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 FOSL2P15408 326 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 GRK4P32298 578 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 MRE11P49959 708 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 HLFQ16534 295 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
PPP1R3E-204ENST00000559942 RIMBP2O15034 1052 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 ECE2O60344 883 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 UBXN2AP68543 259 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 ZSWIM8A7E2V4 1837 aa12.73□□□□□ -0.37
PPP1R3E-204ENST00000559942 ABCC4O15439 1325 aa12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 CAPN2P17655 700 aa12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 TAF1CQ15572 869 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 PAWRQ96IZ0 340 aaKnown RBP12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 FMNL2Q96PY5 1086 aa12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 UHRF1Q96T88 793 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 MYOZ2Q9NPC6 264 aa12.72□□□□□ -0.37
PPP1R3E-204ENST00000559942 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 LACTBP83111 547 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
PPP1R3E-204ENST00000559942 RIPOR2Q9Y4F9 1068 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms