RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SYT17Q9BSW7 474 aa20.43■□□□□ 0.86
TPM1-219ENST00000559397 BSDC1Q9NW68 430 aaPredicted RBP20.43■□□□□ 0.86
TPM1-219ENST00000559397 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
TPM1-219ENST00000559397 RIPOR2Q9Y4F9 1068 aa20.43■□□□□ 0.86
TPM1-219ENST00000559397 EYA2O00167 538 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 SURF6O75683 361 aaKnown RBP20.42■□□□□ 0.86
TPM1-219ENST00000559397 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 LNPKQ9C0E8 428 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 SIL1Q9H173 461 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 CIAO1O76071 339 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 PRPF40BQ6NWY9 871 aaKnown RBP20.42■□□□□ 0.86
TPM1-219ENST00000559397 TTLL6Q8N841 843 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
TPM1-219ENST00000559397 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
TPM1-219ENST00000559397 SLC51AQ86UW1 340 aa20.41■□□□□ 0.86
TPM1-219ENST00000559397 CNNM1Q9NRU3 951 aa20.41■□□□□ 0.86
TPM1-219ENST00000559397 EXOC6BQ9Y2D4 811 aa20.41■□□□□ 0.86
TPM1-219ENST00000559397 LRRC37AA6NMS7 1700 aa20.4■□□□□ 0.86
TPM1-219ENST00000559397 G3BP1Q13283 466 aaKnown RBP eCLIP20.4■□□□□ 0.86
TPM1-219ENST00000559397 TMC4Q7Z404 712 aa20.4■□□□□ 0.86
TPM1-219ENST00000559397 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.86
TPM1-219ENST00000559397 C7orf43Q8WVR3 580 aa20.39■□□□□ 0.86
TPM1-219ENST00000559397 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.86
TPM1-219ENST00000559397 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.86
TPM1-219ENST00000559397 A0A1B0GUL6 1792 aa20.39■□□□□ 0.85
TPM1-219ENST00000559397 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
TPM1-219ENST00000559397 SASH1O94885 1247 aa20.38■□□□□ 0.85
TPM1-219ENST00000559397 HSP90AB4PQ58FF6 505 aa20.38■□□□□ 0.85
TPM1-219ENST00000559397 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
TPM1-219ENST00000559397 MROH5Q6ZUA9 1318 aa20.37■□□□□ 0.85
TPM1-219ENST00000559397 RAB11FIP3O75154 756 aa20.37■□□□□ 0.85
TPM1-219ENST00000559397 CHRNDQ07001 517 aa20.36■□□□□ 0.85
TPM1-219ENST00000559397 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
TPM1-219ENST00000559397 VGLL2Q8N8G2 317 aa20.36■□□□□ 0.85
TPM1-219ENST00000559397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.36■□□□□ 0.85
TPM1-219ENST00000559397 OS9Q13438 667 aaPredicted RBP20.35■□□□□ 0.85
TPM1-219ENST00000559397 WWC3Q9ULE0 1092 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 LTBP1Q14766 1721 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 METTL24Q5JXM2 366 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 ERC1Q8IUD2 1116 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
TPM1-219ENST00000559397 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
TPM1-219ENST00000559397 TFCP2Q12800 502 aa20.34■□□□□ 0.85
TPM1-219ENST00000559397 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
TPM1-219ENST00000559397 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
TPM1-219ENST00000559397 APBB1O00213 710 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 C21orf2O43822 256 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 PDE8BO95263 885 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 GPSM2P81274 684 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
TPM1-219ENST00000559397 ANKRD2Q9GZV1 360 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 BCS1LQ9Y276 419 aa20.33■□□□□ 0.85
TPM1-219ENST00000559397 TAF5LO75529 589 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 LRRCC1Q9C099 1032 aa20.32■□□□□ 0.84
TPM1-219ENST00000559397 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
TPM1-219ENST00000559397 XDHP47989 1333 aa20.31■□□□□ 0.84
TPM1-219ENST00000559397 WTIPA6NIX2 430 aaPredicted RBP20.31■□□□□ 0.84
TPM1-219ENST00000559397 SMARCA5O60264 1052 aaPredicted RBP20.31■□□□□ 0.84
TPM1-219ENST00000559397 TMX4Q9H1E5 349 aaPredicted RBP20.31■□□□□ 0.84
TPM1-219ENST00000559397 NSFL1CQ9UNZ2 370 aaKnown RBP20.31■□□□□ 0.84
TPM1-219ENST00000559397 DUOX1Q9NRD9 1551 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 SNAP23O00161 211 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 FGFR2P21802 821 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 BMP2KLQ5H9B9 411 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 GPR108Q9NPR9 543 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 UTRNP46939 3433 aa20.3■□□□□ 0.84
TPM1-219ENST00000559397 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 C16orf71Q8IYS4 520 aaPredicted RBP20.29■□□□□ 0.84
TPM1-219ENST00000559397 MPNDQ8N594 471 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 PUM3Q15397 648 aaKnown RBP20.29■□□□□ 0.84
TPM1-219ENST00000559397 GRIPAP1Q4V328 841 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 TNNI3KQ59H18 835 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 TBC1D16Q8TBP0 767 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 FPGT-TNNI3KV9GXZ4 949 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 FER1L6Q2WGJ9 1857 aa20.29■□□□□ 0.84
TPM1-219ENST00000559397 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
TPM1-219ENST00000559397 UBE4AQ14139 1066 aa20.28■□□□□ 0.84
TPM1-219ENST00000559397 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
TPM1-219ENST00000559397 EAF2Q96CJ1 260 aaPredicted RBP20.28■□□□□ 0.84
TPM1-219ENST00000559397 GGA1Q9UJY5 639 aa20.28■□□□□ 0.84
TPM1-219ENST00000559397 ZNF609O15014 1411 aa20.28■□□□□ 0.84
TPM1-219ENST00000559397 ZNF804BA4D1E1 1349 aa20.27■□□□□ 0.84
TPM1-219ENST00000559397 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
TPM1-219ENST00000559397 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
TPM1-219ENST00000559397 AKAP2Q9Y2D5 859 aa20.27■□□□□ 0.84
TPM1-219ENST00000559397 SALL3Q9BXA9 1300 aa20.27■□□□□ 0.84
TPM1-219ENST00000559397 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
TPM1-219ENST00000559397 A0A1B0GUL7 405 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms